Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.8■□□□□ 0.44
Usp8Q80U87 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp8Q80U87 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Usp8Q80U87 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.8■□□□□ 0.44
Usp8Q80U87 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.8■□□□□ 0.44
Usp8Q80U87 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Usp8Q80U87 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Usp8Q80U87 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.8■□□□□ 0.44
Usp8Q80U87 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp8Q80U87 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp8Q80U87 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp8Q80U87 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp8Q80U87 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp8Q80U87 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp8Q80U87 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp8Q80U87 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp8Q80U87 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Usp8Q80U87 Gm22325-201ENSMUST00000158904 308 ntBASIC17.79■□□□□ 0.44
Usp8Q80U87 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.79■□□□□ 0.44
Usp8Q80U87 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp8Q80U87 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp8Q80U87 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp8Q80U87 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.79■□□□□ 0.44
Usp8Q80U87 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Usp8Q80U87 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp8Q80U87 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Usp8Q80U87 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Usp8Q80U87 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp8Q80U87 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.78■□□□□ 0.44
Usp8Q80U87 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp8Q80U87 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp8Q80U87 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp8Q80U87 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp8Q80U87 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp8Q80U87 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Usp8Q80U87 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Usp8Q80U87 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.78■□□□□ 0.44
Usp8Q80U87 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp8Q80U87 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp8Q80U87 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp8Q80U87 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp8Q80U87 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp8Q80U87 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.78■□□□□ 0.44
Usp8Q80U87 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp8Q80U87 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp8Q80U87 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp8Q80U87 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.77■□□□□ 0.44
Usp8Q80U87 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp8Q80U87 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.77■□□□□ 0.44
Usp8Q80U87 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.77■□□□□ 0.44
Usp8Q80U87 Gm26571-201ENSMUST00000181399 666 ntBASIC17.77■□□□□ 0.44
Usp8Q80U87 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp8Q80U87 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp8Q80U87 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp8Q80U87 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp8Q80U87 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Usp8Q80U87 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Usp8Q80U87 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Usp8Q80U87 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp8Q80U87 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Usp8Q80U87 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp8Q80U87 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp8Q80U87 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp8Q80U87 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Usp8Q80U87 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Usp8Q80U87 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp8Q80U87 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp8Q80U87 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.76■□□□□ 0.43
Usp8Q80U87 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.76■□□□□ 0.43
Usp8Q80U87 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp8Q80U87 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp8Q80U87 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp8Q80U87 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Usp8Q80U87 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp8Q80U87 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp8Q80U87 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp8Q80U87 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Usp8Q80U87 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp8Q80U87 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp8Q80U87 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp8Q80U87 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp8Q80U87 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp8Q80U87 Tgds-204ENSMUST00000228543 1594 ntBASIC17.75■□□□□ 0.43
Usp8Q80U87 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp8Q80U87 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp8Q80U87 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Usp8Q80U87 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.75■□□□□ 0.43
Usp8Q80U87 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.75■□□□□ 0.43
Usp8Q80U87 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.75■□□□□ 0.43
Usp8Q80U87 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp8Q80U87 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp8Q80U87 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp8Q80U87 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp8Q80U87 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp8Q80U87 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp8Q80U87 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp8Q80U87 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp8Q80U87 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Usp8Q80U87 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Usp8Q80U87 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms