Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cspg5Q71M36 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cspg5Q71M36 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cspg5Q71M36 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cspg5Q71M36 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cspg5Q71M36 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cspg5Q71M36 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cspg5Q71M36 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cspg5Q71M36 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Cspg5Q71M36 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cspg5Q71M36 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.37■□□□□ 0.53
Cspg5Q71M36 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.37■□□□□ 0.53
Cspg5Q71M36 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cspg5Q71M36 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.37■□□□□ 0.53
Cspg5Q71M36 Gm42545-201ENSMUST00000202755 922 ntBASIC18.37■□□□□ 0.53
Cspg5Q71M36 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.37■□□□□ 0.53
Cspg5Q71M36 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cspg5Q71M36 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.37■□□□□ 0.53
Cspg5Q71M36 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Cspg5Q71M36 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cspg5Q71M36 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cspg5Q71M36 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Cspg5Q71M36 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cspg5Q71M36 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cspg5Q71M36 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.37■□□□□ 0.53
Cspg5Q71M36 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cspg5Q71M36 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.36■□□□□ 0.53
Cspg5Q71M36 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cspg5Q71M36 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cspg5Q71M36 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cspg5Q71M36 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.36■□□□□ 0.53
Cspg5Q71M36 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.36■□□□□ 0.53
Cspg5Q71M36 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cspg5Q71M36 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.36■□□□□ 0.53
Cspg5Q71M36 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.36■□□□□ 0.53
Cspg5Q71M36 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Cspg5Q71M36 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Cspg5Q71M36 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cspg5Q71M36 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Cspg5Q71M36 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cspg5Q71M36 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cspg5Q71M36 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cspg5Q71M36 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cspg5Q71M36 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cspg5Q71M36 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Cspg5Q71M36 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cspg5Q71M36 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.36■□□□□ 0.53
Cspg5Q71M36 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cspg5Q71M36 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cspg5Q71M36 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.35■□□□□ 0.53
Cspg5Q71M36 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cspg5Q71M36 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cspg5Q71M36 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cspg5Q71M36 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cspg5Q71M36 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cspg5Q71M36 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Cspg5Q71M36 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cspg5Q71M36 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.35■□□□□ 0.53
Cspg5Q71M36 Gm7889-201ENSMUST00000185591 958 ntBASIC18.35■□□□□ 0.53
Cspg5Q71M36 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.35■□□□□ 0.53
Cspg5Q71M36 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cspg5Q71M36 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Cspg5Q71M36 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cspg5Q71M36 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cspg5Q71M36 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cspg5Q71M36 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cspg5Q71M36 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.34■□□□□ 0.53
Cspg5Q71M36 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cspg5Q71M36 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
Cspg5Q71M36 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Cspg5Q71M36 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cspg5Q71M36 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Cspg5Q71M36 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cspg5Q71M36 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cspg5Q71M36 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Cspg5Q71M36 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.34■□□□□ 0.53
Cspg5Q71M36 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cspg5Q71M36 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cspg5Q71M36 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cspg5Q71M36 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cspg5Q71M36 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cspg5Q71M36 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.33■□□□□ 0.53
Cspg5Q71M36 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cspg5Q71M36 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Cspg5Q71M36 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.33■□□□□ 0.52
Cspg5Q71M36 Gm11539-201ENSMUST00000119837 557 ntBASIC18.33■□□□□ 0.52
Cspg5Q71M36 Gm13436-201ENSMUST00000120418 567 ntBASIC18.33■□□□□ 0.52
Cspg5Q71M36 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cspg5Q71M36 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.33■□□□□ 0.52
Cspg5Q71M36 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cspg5Q71M36 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.33■□□□□ 0.52
Cspg5Q71M36 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cspg5Q71M36 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cspg5Q71M36 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cspg5Q71M36 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cspg5Q71M36 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Cspg5Q71M36 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Cspg5Q71M36 BC021767-201ENSMUST00000126387 1716 ntBASIC18.32■□□□□ 0.52
Cspg5Q71M36 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cspg5Q71M36 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms