Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx55Q6ZPL9 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Ddx55Q6ZPL9 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx55Q6ZPL9 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Ddx55Q6ZPL9 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx55Q6ZPL9 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx55Q6ZPL9 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx55Q6ZPL9 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.27■□□□□ 0.84
Ddx55Q6ZPL9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx55Q6ZPL9 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx55Q6ZPL9 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx55Q6ZPL9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
Ddx55Q6ZPL9 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx55Q6ZPL9 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.27■□□□□ 0.84
Ddx55Q6ZPL9 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx55Q6ZPL9 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx55Q6ZPL9 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx55Q6ZPL9 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC20.27■□□□□ 0.84
Ddx55Q6ZPL9 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx55Q6ZPL9 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx55Q6ZPL9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx55Q6ZPL9 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx55Q6ZPL9 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ddx55Q6ZPL9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ddx55Q6ZPL9 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ddx55Q6ZPL9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx55Q6ZPL9 Tgds-204ENSMUST00000228543 1594 ntBASIC20.26■□□□□ 0.83
Ddx55Q6ZPL9 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Ddx55Q6ZPL9 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx55Q6ZPL9 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx55Q6ZPL9 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Ddx55Q6ZPL9 Gm29791-202ENSMUST00000207888 369 ntBASIC20.26■□□□□ 0.83
Ddx55Q6ZPL9 Gm18669-201ENSMUST00000216049 778 ntBASIC20.26■□□□□ 0.83
Ddx55Q6ZPL9 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Ddx55Q6ZPL9 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx55Q6ZPL9 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx55Q6ZPL9 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Ddx55Q6ZPL9 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx55Q6ZPL9 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx55Q6ZPL9 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.25■□□□□ 0.83
Ddx55Q6ZPL9 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx55Q6ZPL9 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.25■□□□□ 0.83
Ddx55Q6ZPL9 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx55Q6ZPL9 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx55Q6ZPL9 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx55Q6ZPL9 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
Ddx55Q6ZPL9 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx55Q6ZPL9 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx55Q6ZPL9 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx55Q6ZPL9 Gm37025-201ENSMUST00000195159 829 ntBASIC20.24■□□□□ 0.83
Ddx55Q6ZPL9 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx55Q6ZPL9 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx55Q6ZPL9 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx55Q6ZPL9 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx55Q6ZPL9 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx55Q6ZPL9 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx55Q6ZPL9 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx55Q6ZPL9 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx55Q6ZPL9 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx55Q6ZPL9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx55Q6ZPL9 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Ddx55Q6ZPL9 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx55Q6ZPL9 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Ddx55Q6ZPL9 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx55Q6ZPL9 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
Ddx55Q6ZPL9 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx55Q6ZPL9 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Ddx55Q6ZPL9 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
Ddx55Q6ZPL9 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Ddx55Q6ZPL9 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx55Q6ZPL9 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC20.23■□□□□ 0.83
Ddx55Q6ZPL9 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx55Q6ZPL9 Gm7461-201ENSMUST00000058918 827 ntBASIC20.23■□□□□ 0.83
Ddx55Q6ZPL9 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx55Q6ZPL9 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Ddx55Q6ZPL9 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Ddx55Q6ZPL9 Gm11355-201ENSMUST00000121120 306 ntBASIC20.22■□□□□ 0.83
Ddx55Q6ZPL9 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
Ddx55Q6ZPL9 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Ddx55Q6ZPL9 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.22■□□□□ 0.83
Ddx55Q6ZPL9 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx55Q6ZPL9 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Ddx55Q6ZPL9 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx55Q6ZPL9 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx55Q6ZPL9 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx55Q6ZPL9 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.22■□□□□ 0.83
Ddx55Q6ZPL9 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx55Q6ZPL9 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx55Q6ZPL9 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx55Q6ZPL9 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx55Q6ZPL9 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx55Q6ZPL9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Ddx55Q6ZPL9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx55Q6ZPL9 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx55Q6ZPL9 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC20.21■□□□□ 0.83
Ddx55Q6ZPL9 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx55Q6ZPL9 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Ddx55Q6ZPL9 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx55Q6ZPL9 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx55Q6ZPL9 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms