Protein–RNA interactions for Protein: Q6X893

Slc44a1, Choline transporter-like protein 1, mousemouse

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a1Q6X893 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc44a1Q6X893 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc44a1Q6X893 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc44a1Q6X893 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.61■□□□□ 0.89
Slc44a1Q6X893 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.61■□□□□ 0.89
Slc44a1Q6X893 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Slc44a1Q6X893 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc44a1Q6X893 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc44a1Q6X893 Mir1199-201ENSMUST00000117015 119 ntBASIC20.6■□□□□ 0.89
Slc44a1Q6X893 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Slc44a1Q6X893 Mir8112-201ENSMUST00000184382 131 ntBASIC20.6■□□□□ 0.89
Slc44a1Q6X893 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc44a1Q6X893 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc44a1Q6X893 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc44a1Q6X893 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc44a1Q6X893 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
Slc44a1Q6X893 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Slc44a1Q6X893 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc44a1Q6X893 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.59■□□□□ 0.89
Slc44a1Q6X893 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.59■□□□□ 0.89
Slc44a1Q6X893 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.59■□□□□ 0.89
Slc44a1Q6X893 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Slc44a1Q6X893 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.59■□□□□ 0.89
Slc44a1Q6X893 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc44a1Q6X893 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slc44a1Q6X893 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slc44a1Q6X893 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slc44a1Q6X893 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.58■□□□□ 0.89
Slc44a1Q6X893 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slc44a1Q6X893 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Slc44a1Q6X893 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Slc44a1Q6X893 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.58■□□□□ 0.89
Slc44a1Q6X893 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slc44a1Q6X893 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.58■□□□□ 0.88
Slc44a1Q6X893 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Slc44a1Q6X893 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Slc44a1Q6X893 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Slc44a1Q6X893 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.58■□□□□ 0.88
Slc44a1Q6X893 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Slc44a1Q6X893 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.58■□□□□ 0.88
Slc44a1Q6X893 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Slc44a1Q6X893 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Slc44a1Q6X893 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc44a1Q6X893 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Slc44a1Q6X893 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc44a1Q6X893 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc44a1Q6X893 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Slc44a1Q6X893 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Slc44a1Q6X893 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc44a1Q6X893 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc44a1Q6X893 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc44a1Q6X893 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.57■□□□□ 0.88
Slc44a1Q6X893 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc44a1Q6X893 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Slc44a1Q6X893 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc44a1Q6X893 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.57■□□□□ 0.88
Slc44a1Q6X893 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Slc44a1Q6X893 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc44a1Q6X893 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc44a1Q6X893 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc44a1Q6X893 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.57■□□□□ 0.88
Slc44a1Q6X893 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc44a1Q6X893 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc44a1Q6X893 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc44a1Q6X893 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Slc44a1Q6X893 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Slc44a1Q6X893 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Slc44a1Q6X893 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.56■□□□□ 0.88
Slc44a1Q6X893 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc44a1Q6X893 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.56■□□□□ 0.88
Slc44a1Q6X893 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.56■□□□□ 0.88
Slc44a1Q6X893 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.56■□□□□ 0.88
Slc44a1Q6X893 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.56■□□□□ 0.88
Slc44a1Q6X893 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Slc44a1Q6X893 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Slc44a1Q6X893 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Slc44a1Q6X893 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Slc44a1Q6X893 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.55■□□□□ 0.88
Slc44a1Q6X893 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
Slc44a1Q6X893 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc44a1Q6X893 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Slc44a1Q6X893 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Slc44a1Q6X893 Gm10517-202ENSMUST00000192970 758 ntBASIC20.55■□□□□ 0.88
Slc44a1Q6X893 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc44a1Q6X893 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.55■□□□□ 0.88
Slc44a1Q6X893 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc44a1Q6X893 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.55■□□□□ 0.88
Slc44a1Q6X893 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Slc44a1Q6X893 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc44a1Q6X893 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc44a1Q6X893 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.54■□□□□ 0.88
Slc44a1Q6X893 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Slc44a1Q6X893 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.54■□□□□ 0.88
Slc44a1Q6X893 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Slc44a1Q6X893 Gm4974-201ENSMUST00000209974 875 ntBASIC20.54■□□□□ 0.88
Slc44a1Q6X893 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc44a1Q6X893 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc44a1Q6X893 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc44a1Q6X893 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc44a1Q6X893 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms