Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scaf4Q6PFF0 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Scaf4Q6PFF0 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Scaf4Q6PFF0 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Scaf4Q6PFF0 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scaf4Q6PFF0 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scaf4Q6PFF0 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Scaf4Q6PFF0 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Scaf4Q6PFF0 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scaf4Q6PFF0 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scaf4Q6PFF0 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scaf4Q6PFF0 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scaf4Q6PFF0 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Scaf4Q6PFF0 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scaf4Q6PFF0 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Scaf4Q6PFF0 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scaf4Q6PFF0 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scaf4Q6PFF0 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scaf4Q6PFF0 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.55■□□□□ 0.4
Scaf4Q6PFF0 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scaf4Q6PFF0 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Scaf4Q6PFF0 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scaf4Q6PFF0 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scaf4Q6PFF0 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scaf4Q6PFF0 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.55■□□□□ 0.4
Scaf4Q6PFF0 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Scaf4Q6PFF0 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.55■□□□□ 0.4
Scaf4Q6PFF0 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scaf4Q6PFF0 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Scaf4Q6PFF0 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Scaf4Q6PFF0 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scaf4Q6PFF0 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.55■□□□□ 0.4
Scaf4Q6PFF0 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scaf4Q6PFF0 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scaf4Q6PFF0 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Scaf4Q6PFF0 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scaf4Q6PFF0 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.54■□□□□ 0.4
Scaf4Q6PFF0 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Scaf4Q6PFF0 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scaf4Q6PFF0 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scaf4Q6PFF0 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scaf4Q6PFF0 Gm13234-201ENSMUST00000120010 747 ntBASIC17.54■□□□□ 0.4
Scaf4Q6PFF0 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Scaf4Q6PFF0 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Scaf4Q6PFF0 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Scaf4Q6PFF0 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scaf4Q6PFF0 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scaf4Q6PFF0 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scaf4Q6PFF0 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scaf4Q6PFF0 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scaf4Q6PFF0 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.53■□□□□ 0.4
Scaf4Q6PFF0 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scaf4Q6PFF0 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.53■□□□□ 0.4
Scaf4Q6PFF0 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scaf4Q6PFF0 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scaf4Q6PFF0 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scaf4Q6PFF0 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Scaf4Q6PFF0 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Scaf4Q6PFF0 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scaf4Q6PFF0 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scaf4Q6PFF0 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scaf4Q6PFF0 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Scaf4Q6PFF0 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scaf4Q6PFF0 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scaf4Q6PFF0 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scaf4Q6PFF0 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.52■□□□□ 0.4
Scaf4Q6PFF0 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scaf4Q6PFF0 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.52■□□□□ 0.4
Scaf4Q6PFF0 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scaf4Q6PFF0 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scaf4Q6PFF0 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scaf4Q6PFF0 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scaf4Q6PFF0 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Scaf4Q6PFF0 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.52■□□□□ 0.4
Scaf4Q6PFF0 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.52■□□□□ 0.4
Scaf4Q6PFF0 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.52■□□□□ 0.4
Scaf4Q6PFF0 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.52■□□□□ 0.4
Scaf4Q6PFF0 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Scaf4Q6PFF0 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scaf4Q6PFF0 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Scaf4Q6PFF0 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scaf4Q6PFF0 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Scaf4Q6PFF0 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scaf4Q6PFF0 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scaf4Q6PFF0 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.51■□□□□ 0.39
Scaf4Q6PFF0 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scaf4Q6PFF0 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Scaf4Q6PFF0 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Scaf4Q6PFF0 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.51■□□□□ 0.39
Scaf4Q6PFF0 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.51■□□□□ 0.39
Scaf4Q6PFF0 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scaf4Q6PFF0 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scaf4Q6PFF0 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.51■□□□□ 0.39
Scaf4Q6PFF0 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Scaf4Q6PFF0 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.5■□□□□ 0.39
Scaf4Q6PFF0 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scaf4Q6PFF0 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scaf4Q6PFF0 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.5■□□□□ 0.39
Scaf4Q6PFF0 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Scaf4Q6PFF0 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms