Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Nup98Q6PFD9 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nup98Q6PFD9 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Nup98Q6PFD9 Il3ra-202ENSMUST00000223589 738 ntBASIC21.05■□□□□ 0.96
Nup98Q6PFD9 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nup98Q6PFD9 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Nup98Q6PFD9 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC21.05■□□□□ 0.96
Nup98Q6PFD9 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nup98Q6PFD9 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nup98Q6PFD9 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nup98Q6PFD9 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nup98Q6PFD9 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
Nup98Q6PFD9 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nup98Q6PFD9 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Nup98Q6PFD9 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Nup98Q6PFD9 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Nup98Q6PFD9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Nup98Q6PFD9 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Nup98Q6PFD9 AA414768-201ENSMUST00000121924 1257 ntBASIC21.04■□□□□ 0.96
Nup98Q6PFD9 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nup98Q6PFD9 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nup98Q6PFD9 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nup98Q6PFD9 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Nup98Q6PFD9 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Nup98Q6PFD9 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nup98Q6PFD9 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nup98Q6PFD9 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Nup98Q6PFD9 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Nup98Q6PFD9 Gm18958-201ENSMUST00000174258 762 ntBASIC21.03■□□□□ 0.96
Nup98Q6PFD9 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC21.03■□□□□ 0.96
Nup98Q6PFD9 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Nup98Q6PFD9 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nup98Q6PFD9 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nup98Q6PFD9 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nup98Q6PFD9 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nup98Q6PFD9 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Nup98Q6PFD9 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nup98Q6PFD9 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Nup98Q6PFD9 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Nup98Q6PFD9 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC21.02■□□□□ 0.96
Nup98Q6PFD9 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nup98Q6PFD9 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC21.02■□□□□ 0.96
Nup98Q6PFD9 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Nup98Q6PFD9 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Nup98Q6PFD9 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nup98Q6PFD9 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nup98Q6PFD9 Gm45141-201ENSMUST00000206502 1888 ntBASIC21.02■□□□□ 0.96
Nup98Q6PFD9 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC21.01■□□□□ 0.95
Nup98Q6PFD9 Mir1668-201ENSMUST00000184114 107 ntBASIC21.01■□□□□ 0.95
Nup98Q6PFD9 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC21.01■□□□□ 0.95
Nup98Q6PFD9 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Nup98Q6PFD9 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nup98Q6PFD9 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nup98Q6PFD9 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nup98Q6PFD9 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nup98Q6PFD9 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
Nup98Q6PFD9 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Nup98Q6PFD9 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nup98Q6PFD9 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nup98Q6PFD9 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC21.01■□□□□ 0.95
Nup98Q6PFD9 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC21.01■□□□□ 0.95
Nup98Q6PFD9 Gm33142-201ENSMUST00000193913 867 ntBASIC21.01■□□□□ 0.95
Nup98Q6PFD9 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nup98Q6PFD9 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Nup98Q6PFD9 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nup98Q6PFD9 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC21■□□□□ 0.95
Nup98Q6PFD9 AC154471.1-201ENSMUST00000224418 436 ntBASIC21■□□□□ 0.95
Nup98Q6PFD9 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nup98Q6PFD9 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC21■□□□□ 0.95
Nup98Q6PFD9 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nup98Q6PFD9 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC21■□□□□ 0.95
Nup98Q6PFD9 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21■□□□□ 0.95
Nup98Q6PFD9 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nup98Q6PFD9 Spsb2-203ENSMUST00000112473 1322 ntBASIC20.99■□□□□ 0.95
Nup98Q6PFD9 Mir5130-201ENSMUST00000175160 84 ntBASIC20.99■□□□□ 0.95
Nup98Q6PFD9 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nup98Q6PFD9 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nup98Q6PFD9 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nup98Q6PFD9 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nup98Q6PFD9 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nup98Q6PFD9 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nup98Q6PFD9 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nup98Q6PFD9 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nup98Q6PFD9 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Nup98Q6PFD9 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nup98Q6PFD9 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC20.99■□□□□ 0.95
Nup98Q6PFD9 Gm6728-201ENSMUST00000178117 1065 ntBASIC20.99■□□□□ 0.95
Nup98Q6PFD9 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC20.99■□□□□ 0.95
Nup98Q6PFD9 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
Nup98Q6PFD9 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nup98Q6PFD9 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.98■□□□□ 0.95
Nup98Q6PFD9 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nup98Q6PFD9 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Nup98Q6PFD9 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nup98Q6PFD9 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nup98Q6PFD9 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Nup98Q6PFD9 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nup98Q6PFD9 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nup98Q6PFD9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nup98Q6PFD9 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms