Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.58■□□□□ 0.72
Smchd1Q6P5D8 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.58■□□□□ 0.72
Smchd1Q6P5D8 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Smchd1Q6P5D8 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Smchd1Q6P5D8 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.58■□□□□ 0.72
Smchd1Q6P5D8 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smchd1Q6P5D8 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smchd1Q6P5D8 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smchd1Q6P5D8 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smchd1Q6P5D8 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smchd1Q6P5D8 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Smchd1Q6P5D8 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Smchd1Q6P5D8 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smchd1Q6P5D8 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC19.57■□□□□ 0.72
Smchd1Q6P5D8 Gm4974-201ENSMUST00000209974 875 ntBASIC19.57■□□□□ 0.72
Smchd1Q6P5D8 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smchd1Q6P5D8 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smchd1Q6P5D8 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smchd1Q6P5D8 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smchd1Q6P5D8 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smchd1Q6P5D8 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smchd1Q6P5D8 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Smchd1Q6P5D8 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smchd1Q6P5D8 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smchd1Q6P5D8 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Smchd1Q6P5D8 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Smchd1Q6P5D8 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.56■□□□□ 0.72
Smchd1Q6P5D8 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smchd1Q6P5D8 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Smchd1Q6P5D8 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Smchd1Q6P5D8 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.56■□□□□ 0.72
Smchd1Q6P5D8 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.56■□□□□ 0.72
Smchd1Q6P5D8 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smchd1Q6P5D8 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smchd1Q6P5D8 Gm10418-201ENSMUST00000100943 576 ntBASIC19.55■□□□□ 0.72
Smchd1Q6P5D8 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Smchd1Q6P5D8 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.55■□□□□ 0.72
Smchd1Q6P5D8 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smchd1Q6P5D8 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.55■□□□□ 0.72
Smchd1Q6P5D8 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smchd1Q6P5D8 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Smchd1Q6P5D8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smchd1Q6P5D8 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smchd1Q6P5D8 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.54■□□□□ 0.72
Smchd1Q6P5D8 Gm4217-201ENSMUST00000182243 1002 ntBASIC19.54■□□□□ 0.72
Smchd1Q6P5D8 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
Smchd1Q6P5D8 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smchd1Q6P5D8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smchd1Q6P5D8 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Smchd1Q6P5D8 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smchd1Q6P5D8 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smchd1Q6P5D8 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smchd1Q6P5D8 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smchd1Q6P5D8 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
Smchd1Q6P5D8 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smchd1Q6P5D8 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.53■□□□□ 0.72
Smchd1Q6P5D8 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smchd1Q6P5D8 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smchd1Q6P5D8 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smchd1Q6P5D8 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Smchd1Q6P5D8 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Smchd1Q6P5D8 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC19.53■□□□□ 0.72
Smchd1Q6P5D8 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smchd1Q6P5D8 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.53■□□□□ 0.72
Smchd1Q6P5D8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smchd1Q6P5D8 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smchd1Q6P5D8 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Smchd1Q6P5D8 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Smchd1Q6P5D8 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smchd1Q6P5D8 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Smchd1Q6P5D8 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smchd1Q6P5D8 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Smchd1Q6P5D8 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Smchd1Q6P5D8 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.52■□□□□ 0.72
Smchd1Q6P5D8 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smchd1Q6P5D8 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Smchd1Q6P5D8 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smchd1Q6P5D8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smchd1Q6P5D8 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smchd1Q6P5D8 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smchd1Q6P5D8 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smchd1Q6P5D8 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
Smchd1Q6P5D8 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.52■□□□□ 0.72
Smchd1Q6P5D8 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.52■□□□□ 0.72
Smchd1Q6P5D8 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smchd1Q6P5D8 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Smchd1Q6P5D8 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Smchd1Q6P5D8 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smchd1Q6P5D8 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smchd1Q6P5D8 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smchd1Q6P5D8 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smchd1Q6P5D8 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.51■□□□□ 0.71
Smchd1Q6P5D8 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Smchd1Q6P5D8 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smchd1Q6P5D8 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smchd1Q6P5D8 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smchd1Q6P5D8 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smchd1Q6P5D8 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smchd1Q6P5D8 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smchd1Q6P5D8 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms