Protein–RNA interactions for Protein: Q6DID3

Scaf8, Protein SCAF8, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf8Q6DID3 Gm6443-201ENSMUST00000203599 874 ntBASIC20.75■□□□□ 0.91
Scaf8Q6DID3 Gm34391-201ENSMUST00000203706 907 ntBASIC20.75■□□□□ 0.91
Scaf8Q6DID3 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scaf8Q6DID3 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scaf8Q6DID3 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC20.74■□□□□ 0.91
Scaf8Q6DID3 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scaf8Q6DID3 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.74■□□□□ 0.91
Scaf8Q6DID3 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Scaf8Q6DID3 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scaf8Q6DID3 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scaf8Q6DID3 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Scaf8Q6DID3 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scaf8Q6DID3 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.74■□□□□ 0.91
Scaf8Q6DID3 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC20.74■□□□□ 0.91
Scaf8Q6DID3 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Scaf8Q6DID3 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Scaf8Q6DID3 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scaf8Q6DID3 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Scaf8Q6DID3 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Scaf8Q6DID3 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scaf8Q6DID3 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Scaf8Q6DID3 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Scaf8Q6DID3 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scaf8Q6DID3 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scaf8Q6DID3 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Scaf8Q6DID3 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Scaf8Q6DID3 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Scaf8Q6DID3 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scaf8Q6DID3 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Scaf8Q6DID3 Gm27742-201ENSMUST00000184667 60 ntBASIC20.73■□□□□ 0.91
Scaf8Q6DID3 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scaf8Q6DID3 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scaf8Q6DID3 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scaf8Q6DID3 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Scaf8Q6DID3 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Scaf8Q6DID3 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scaf8Q6DID3 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Scaf8Q6DID3 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scaf8Q6DID3 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scaf8Q6DID3 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scaf8Q6DID3 Gm13401-201ENSMUST00000117074 291 ntBASIC20.72■□□□□ 0.91
Scaf8Q6DID3 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
Scaf8Q6DID3 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scaf8Q6DID3 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Scaf8Q6DID3 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scaf8Q6DID3 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Scaf8Q6DID3 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scaf8Q6DID3 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Scaf8Q6DID3 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Scaf8Q6DID3 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Scaf8Q6DID3 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scaf8Q6DID3 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scaf8Q6DID3 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Scaf8Q6DID3 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scaf8Q6DID3 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC20.71■□□□□ 0.91
Scaf8Q6DID3 Gm6623-201ENSMUST00000173570 544 ntBASIC20.71■□□□□ 0.91
Scaf8Q6DID3 Gm27357-201ENSMUST00000183754 135 ntBASIC20.71■□□□□ 0.91
Scaf8Q6DID3 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scaf8Q6DID3 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.71■□□□□ 0.91
Scaf8Q6DID3 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC20.71■□□□□ 0.91
Scaf8Q6DID3 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scaf8Q6DID3 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.71■□□□□ 0.91
Scaf8Q6DID3 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scaf8Q6DID3 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scaf8Q6DID3 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scaf8Q6DID3 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scaf8Q6DID3 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scaf8Q6DID3 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Scaf8Q6DID3 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Scaf8Q6DID3 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Scaf8Q6DID3 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Scaf8Q6DID3 Gm5864-201ENSMUST00000202263 970 ntBASIC20.7■□□□□ 0.9
Scaf8Q6DID3 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scaf8Q6DID3 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scaf8Q6DID3 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scaf8Q6DID3 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Scaf8Q6DID3 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scaf8Q6DID3 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Scaf8Q6DID3 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Scaf8Q6DID3 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Scaf8Q6DID3 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC20.69■□□□□ 0.9
Scaf8Q6DID3 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scaf8Q6DID3 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scaf8Q6DID3 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Scaf8Q6DID3 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Scaf8Q6DID3 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Scaf8Q6DID3 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scaf8Q6DID3 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Scaf8Q6DID3 Mir770-201ENSMUST00000103252 94 ntBASIC20.68■□□□□ 0.9
Scaf8Q6DID3 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scaf8Q6DID3 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scaf8Q6DID3 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Scaf8Q6DID3 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scaf8Q6DID3 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Scaf8Q6DID3 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scaf8Q6DID3 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
Scaf8Q6DID3 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Scaf8Q6DID3 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Scaf8Q6DID3 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scaf8Q6DID3 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms