Protein–RNA interactions for Protein: Q6DIC0

Smarca2, Probable global transcription activator SNF2L2, mousemouse

Predictions only

Length 1,577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2Q6DIC0 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Smarca2Q6DIC0 Gm5784-201ENSMUST00000179344 2478 ntBASIC31.36■■■□□ 2.61
Smarca2Q6DIC0 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
Smarca2Q6DIC0 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC31.36■■■□□ 2.61
Smarca2Q6DIC0 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC31.36■■■□□ 2.61
Smarca2Q6DIC0 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC31.36■■■□□ 2.61
Smarca2Q6DIC0 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Smarca2Q6DIC0 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC31.36■■■□□ 2.61
Smarca2Q6DIC0 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Smarca2Q6DIC0 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Smarca2Q6DIC0 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC31.35■■■□□ 2.61
Smarca2Q6DIC0 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Smarca2Q6DIC0 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Smarca2Q6DIC0 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
Smarca2Q6DIC0 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC31.34■■■□□ 2.61
Smarca2Q6DIC0 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC31.34■■■□□ 2.61
Smarca2Q6DIC0 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Smarca2Q6DIC0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC31.34■■■□□ 2.61
Smarca2Q6DIC0 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC31.34■■■□□ 2.61
Smarca2Q6DIC0 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC31.34■■■□□ 2.61
Smarca2Q6DIC0 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC31.34■■■□□ 2.61
Smarca2Q6DIC0 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Smarca2Q6DIC0 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC31.34■■■□□ 2.61
Smarca2Q6DIC0 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
Smarca2Q6DIC0 Gm6443-201ENSMUST00000203599 874 ntBASIC31.34■■■□□ 2.61
Smarca2Q6DIC0 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Smarca2Q6DIC0 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC31.33■■■□□ 2.61
Smarca2Q6DIC0 Gm43545-201ENSMUST00000196765 2779 ntBASIC31.33■■■□□ 2.61
Smarca2Q6DIC0 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC31.33■■■□□ 2.61
Smarca2Q6DIC0 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Smarca2Q6DIC0 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC31.33■■■□□ 2.61
Smarca2Q6DIC0 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Smarca2Q6DIC0 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Smarca2Q6DIC0 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Smarca2Q6DIC0 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Smarca2Q6DIC0 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC31.32■■■□□ 2.61
Smarca2Q6DIC0 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Smarca2Q6DIC0 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC31.32■■■□□ 2.6
Smarca2Q6DIC0 AC120002.2-201ENSMUST00000220205 773 ntBASIC31.32■■■□□ 2.6
Smarca2Q6DIC0 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Smarca2Q6DIC0 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC31.32■■■□□ 2.6
Smarca2Q6DIC0 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Smarca2Q6DIC0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC31.31■■■□□ 2.6
Smarca2Q6DIC0 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC31.31■■■□□ 2.6
Smarca2Q6DIC0 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC31.31■■■□□ 2.6
Smarca2Q6DIC0 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC31.31■■■□□ 2.6
Smarca2Q6DIC0 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC31.31■■■□□ 2.6
Smarca2Q6DIC0 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC31.31■■■□□ 2.6
Smarca2Q6DIC0 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Smarca2Q6DIC0 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC31.31■■■□□ 2.6
Smarca2Q6DIC0 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Smarca2Q6DIC0 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Smarca2Q6DIC0 Gm11355-201ENSMUST00000121120 306 ntBASIC31.3■■■□□ 2.6
Smarca2Q6DIC0 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC31.3■■■□□ 2.6
Smarca2Q6DIC0 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Smarca2Q6DIC0 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC31.3■■■□□ 2.6
Smarca2Q6DIC0 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
Smarca2Q6DIC0 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
Smarca2Q6DIC0 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Smarca2Q6DIC0 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Smarca2Q6DIC0 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Smarca2Q6DIC0 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Smarca2Q6DIC0 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC31.29■■■□□ 2.6
Smarca2Q6DIC0 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
Smarca2Q6DIC0 Actl10-202ENSMUST00000226583 1501 ntBASIC31.29■■■□□ 2.6
Smarca2Q6DIC0 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Smarca2Q6DIC0 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC31.29■■■□□ 2.6
Smarca2Q6DIC0 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Smarca2Q6DIC0 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC31.29■■■□□ 2.6
Smarca2Q6DIC0 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Smarca2Q6DIC0 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Smarca2Q6DIC0 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC31.28■■■□□ 2.6
Smarca2Q6DIC0 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC31.28■■■□□ 2.6
Smarca2Q6DIC0 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC31.28■■■□□ 2.6
Smarca2Q6DIC0 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC31.28■■■□□ 2.6
Smarca2Q6DIC0 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC31.28■■■□□ 2.6
Smarca2Q6DIC0 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC31.28■■■□□ 2.6
Smarca2Q6DIC0 Gm27742-201ENSMUST00000184667 60 ntBASIC31.28■■■□□ 2.6
Smarca2Q6DIC0 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC31.28■■■□□ 2.6
Smarca2Q6DIC0 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
Smarca2Q6DIC0 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Smarca2Q6DIC0 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC31.27■■■□□ 2.6
Smarca2Q6DIC0 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Smarca2Q6DIC0 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC31.27■■■□□ 2.6
Smarca2Q6DIC0 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
Smarca2Q6DIC0 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
Smarca2Q6DIC0 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC31.26■■■□□ 2.6
Smarca2Q6DIC0 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
Smarca2Q6DIC0 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
Smarca2Q6DIC0 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Smarca2Q6DIC0 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Smarca2Q6DIC0 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Smarca2Q6DIC0 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC31.26■■■□□ 2.59
Smarca2Q6DIC0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.59
Smarca2Q6DIC0 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Smarca2Q6DIC0 Mir8112-201ENSMUST00000184382 131 ntBASIC31.26■■■□□ 2.59
Smarca2Q6DIC0 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Smarca2Q6DIC0 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Smarca2Q6DIC0 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Smarca2Q6DIC0 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms