Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhga7Q6DD96 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.21■□□□□ 0.35
Pcdhga7Q6DD96 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.21■□□□□ 0.35
Pcdhga7Q6DD96 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhga7Q6DD96 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Pcdhga7Q6DD96 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Pcdhga7Q6DD96 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.21■□□□□ 0.35
Pcdhga7Q6DD96 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhga7Q6DD96 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
Pcdhga7Q6DD96 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Pcdhga7Q6DD96 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.2■□□□□ 0.34
Pcdhga7Q6DD96 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhga7Q6DD96 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhga7Q6DD96 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhga7Q6DD96 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhga7Q6DD96 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhga7Q6DD96 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.2■□□□□ 0.34
Pcdhga7Q6DD96 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhga7Q6DD96 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhga7Q6DD96 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhga7Q6DD96 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhga7Q6DD96 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhga7Q6DD96 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhga7Q6DD96 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhga7Q6DD96 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhga7Q6DD96 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhga7Q6DD96 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhga7Q6DD96 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.19■□□□□ 0.34
Pcdhga7Q6DD96 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhga7Q6DD96 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.19■□□□□ 0.34
Pcdhga7Q6DD96 Gm7291-201ENSMUST00000199147 382 ntBASIC17.19■□□□□ 0.34
Pcdhga7Q6DD96 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Pcdhga7Q6DD96 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhga7Q6DD96 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.19■□□□□ 0.34
Pcdhga7Q6DD96 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhga7Q6DD96 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhga7Q6DD96 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhga7Q6DD96 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhga7Q6DD96 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhga7Q6DD96 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhga7Q6DD96 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhga7Q6DD96 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.19■□□□□ 0.34
Pcdhga7Q6DD96 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhga7Q6DD96 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhga7Q6DD96 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhga7Q6DD96 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhga7Q6DD96 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga7Q6DD96 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga7Q6DD96 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga7Q6DD96 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga7Q6DD96 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.18■□□□□ 0.34
Pcdhga7Q6DD96 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.18■□□□□ 0.34
Pcdhga7Q6DD96 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga7Q6DD96 Gm8969-201ENSMUST00000199694 526 ntBASIC17.18■□□□□ 0.34
Pcdhga7Q6DD96 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga7Q6DD96 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga7Q6DD96 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga7Q6DD96 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhga7Q6DD96 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhga7Q6DD96 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhga7Q6DD96 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga7Q6DD96 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga7Q6DD96 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga7Q6DD96 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.18■□□□□ 0.34
Pcdhga7Q6DD96 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga7Q6DD96 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga7Q6DD96 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga7Q6DD96 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga7Q6DD96 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
Pcdhga7Q6DD96 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga7Q6DD96 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga7Q6DD96 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.17■□□□□ 0.34
Pcdhga7Q6DD96 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.17■□□□□ 0.34
Pcdhga7Q6DD96 Idnk-204ENSMUST00000226010 1898 ntBASIC17.17■□□□□ 0.34
Pcdhga7Q6DD96 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga7Q6DD96 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga7Q6DD96 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga7Q6DD96 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga7Q6DD96 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
Pcdhga7Q6DD96 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga7Q6DD96 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga7Q6DD96 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga7Q6DD96 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga7Q6DD96 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga7Q6DD96 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga7Q6DD96 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.16■□□□□ 0.34
Pcdhga7Q6DD96 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga7Q6DD96 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.16■□□□□ 0.34
Pcdhga7Q6DD96 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga7Q6DD96 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga7Q6DD96 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Pcdhga7Q6DD96 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga7Q6DD96 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.16■□□□□ 0.34
Pcdhga7Q6DD96 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga7Q6DD96 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga7Q6DD96 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga7Q6DD96 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Pcdhga7Q6DD96 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga7Q6DD96 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga7Q6DD96 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms