Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ecm1Q61508 Mir1668-201ENSMUST00000184114 107 ntBASIC19.73■□□□□ 0.75
Ecm1Q61508 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.73■□□□□ 0.75
Ecm1Q61508 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ecm1Q61508 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ecm1Q61508 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ecm1Q61508 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ecm1Q61508 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Ecm1Q61508 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.73■□□□□ 0.75
Ecm1Q61508 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ecm1Q61508 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Ecm1Q61508 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ecm1Q61508 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ecm1Q61508 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ecm1Q61508 Gm27389-201ENSMUST00000183622 195 ntBASIC19.72■□□□□ 0.75
Ecm1Q61508 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ecm1Q61508 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ecm1Q61508 Il3ra-202ENSMUST00000223589 738 ntBASIC19.72■□□□□ 0.75
Ecm1Q61508 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ecm1Q61508 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Ecm1Q61508 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.71■□□□□ 0.75
Ecm1Q61508 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ecm1Q61508 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ecm1Q61508 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ecm1Q61508 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ecm1Q61508 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ecm1Q61508 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ecm1Q61508 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ecm1Q61508 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ecm1Q61508 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ecm1Q61508 Gm7284-201ENSMUST00000131667 944 ntBASIC19.71■□□□□ 0.75
Ecm1Q61508 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.71■□□□□ 0.75
Ecm1Q61508 Gm9731-201ENSMUST00000209480 747 ntBASIC19.71■□□□□ 0.75
Ecm1Q61508 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ecm1Q61508 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ecm1Q61508 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Ecm1Q61508 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Ecm1Q61508 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.71■□□□□ 0.75
Ecm1Q61508 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.71■□□□□ 0.75
Ecm1Q61508 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.71■□□□□ 0.75
Ecm1Q61508 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ecm1Q61508 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Ecm1Q61508 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Ecm1Q61508 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Ecm1Q61508 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ecm1Q61508 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Ecm1Q61508 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC19.7■□□□□ 0.74
Ecm1Q61508 Gm37025-201ENSMUST00000195159 829 ntBASIC19.7■□□□□ 0.74
Ecm1Q61508 Gm5587-201ENSMUST00000206270 674 ntBASIC19.7■□□□□ 0.74
Ecm1Q61508 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
Ecm1Q61508 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ecm1Q61508 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Ecm1Q61508 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Ecm1Q61508 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ecm1Q61508 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ecm1Q61508 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ecm1Q61508 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ecm1Q61508 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.69■□□□□ 0.74
Ecm1Q61508 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ecm1Q61508 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ecm1Q61508 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ecm1Q61508 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.69■□□□□ 0.74
Ecm1Q61508 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC19.69■□□□□ 0.74
Ecm1Q61508 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC19.69■□□□□ 0.74
Ecm1Q61508 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ecm1Q61508 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ecm1Q61508 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ecm1Q61508 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ecm1Q61508 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ecm1Q61508 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.69■□□□□ 0.74
Ecm1Q61508 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.68■□□□□ 0.74
Ecm1Q61508 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ecm1Q61508 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Ecm1Q61508 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.68■□□□□ 0.74
Ecm1Q61508 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Ecm1Q61508 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC19.68■□□□□ 0.74
Ecm1Q61508 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ecm1Q61508 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ecm1Q61508 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ecm1Q61508 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ecm1Q61508 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ecm1Q61508 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ecm1Q61508 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ecm1Q61508 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ecm1Q61508 Gm9013-201ENSMUST00000132939 882 ntBASIC19.67■□□□□ 0.74
Ecm1Q61508 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC19.67■□□□□ 0.74
Ecm1Q61508 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Ecm1Q61508 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ecm1Q61508 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ecm1Q61508 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Ecm1Q61508 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ecm1Q61508 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC19.66■□□□□ 0.74
Ecm1Q61508 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ecm1Q61508 Gm7213-201ENSMUST00000215977 950 ntBASIC19.66■□□□□ 0.74
Ecm1Q61508 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ecm1Q61508 AC120002.2-201ENSMUST00000220205 773 ntBASIC19.66■□□□□ 0.74
Ecm1Q61508 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ecm1Q61508 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.66■□□□□ 0.74
Ecm1Q61508 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ecm1Q61508 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms