Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.94■□□□□ 0.3
Nr1h4Q60641 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nr1h4Q60641 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Nr1h4Q60641 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nr1h4Q60641 Gm13234-201ENSMUST00000120010 747 ntBASIC16.94■□□□□ 0.3
Nr1h4Q60641 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nr1h4Q60641 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Nr1h4Q60641 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.94■□□□□ 0.3
Nr1h4Q60641 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Nr1h4Q60641 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nr1h4Q60641 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nr1h4Q60641 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nr1h4Q60641 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nr1h4Q60641 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Nr1h4Q60641 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Nr1h4Q60641 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nr1h4Q60641 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nr1h4Q60641 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nr1h4Q60641 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nr1h4Q60641 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nr1h4Q60641 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nr1h4Q60641 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nr1h4Q60641 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.93■□□□□ 0.3
Nr1h4Q60641 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nr1h4Q60641 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Nr1h4Q60641 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nr1h4Q60641 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
Nr1h4Q60641 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nr1h4Q60641 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Nr1h4Q60641 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nr1h4Q60641 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.93■□□□□ 0.3
Nr1h4Q60641 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Nr1h4Q60641 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nr1h4Q60641 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nr1h4Q60641 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nr1h4Q60641 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nr1h4Q60641 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC16.92■□□□□ 0.3
Nr1h4Q60641 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.92■□□□□ 0.3
Nr1h4Q60641 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nr1h4Q60641 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nr1h4Q60641 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nr1h4Q60641 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nr1h4Q60641 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Nr1h4Q60641 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Nr1h4Q60641 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nr1h4Q60641 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nr1h4Q60641 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nr1h4Q60641 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nr1h4Q60641 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nr1h4Q60641 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nr1h4Q60641 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nr1h4Q60641 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nr1h4Q60641 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nr1h4Q60641 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.91■□□□□ 0.3
Nr1h4Q60641 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nr1h4Q60641 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Nr1h4Q60641 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nr1h4Q60641 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nr1h4Q60641 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nr1h4Q60641 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Nr1h4Q60641 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Nr1h4Q60641 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nr1h4Q60641 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.91■□□□□ 0.3
Nr1h4Q60641 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nr1h4Q60641 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nr1h4Q60641 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nr1h4Q60641 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nr1h4Q60641 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1h4Q60641 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.9■□□□□ 0.3
Nr1h4Q60641 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1h4Q60641 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.9■□□□□ 0.3
Nr1h4Q60641 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Nr1h4Q60641 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1h4Q60641 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1h4Q60641 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1h4Q60641 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1h4Q60641 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Nr1h4Q60641 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1h4Q60641 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Nr1h4Q60641 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1h4Q60641 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1h4Q60641 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1h4Q60641 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1h4Q60641 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.3
Nr1h4Q60641 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nr1h4Q60641 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Nr1h4Q60641 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nr1h4Q60641 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
Nr1h4Q60641 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nr1h4Q60641 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nr1h4Q60641 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.89■□□□□ 0.29
Nr1h4Q60641 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Nr1h4Q60641 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Nr1h4Q60641 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nr1h4Q60641 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nr1h4Q60641 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nr1h4Q60641 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Nr1h4Q60641 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nr1h4Q60641 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nr1h4Q60641 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms