Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim38Q5SZ99 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim38Q5SZ99 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trim38Q5SZ99 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Trim38Q5SZ99 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trim38Q5SZ99 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim38Q5SZ99 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.44■□□□□ 0.54
Trim38Q5SZ99 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim38Q5SZ99 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim38Q5SZ99 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim38Q5SZ99 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim38Q5SZ99 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim38Q5SZ99 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim38Q5SZ99 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trim38Q5SZ99 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim38Q5SZ99 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.43■□□□□ 0.54
Trim38Q5SZ99 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trim38Q5SZ99 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.43■□□□□ 0.54
Trim38Q5SZ99 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim38Q5SZ99 Gm10602-201ENSMUST00000098239 609 ntBASIC18.43■□□□□ 0.54
Trim38Q5SZ99 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim38Q5SZ99 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Trim38Q5SZ99 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Trim38Q5SZ99 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.43■□□□□ 0.54
Trim38Q5SZ99 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim38Q5SZ99 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Trim38Q5SZ99 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim38Q5SZ99 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim38Q5SZ99 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim38Q5SZ99 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim38Q5SZ99 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.42■□□□□ 0.54
Trim38Q5SZ99 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim38Q5SZ99 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim38Q5SZ99 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Trim38Q5SZ99 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim38Q5SZ99 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim38Q5SZ99 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.41■□□□□ 0.54
Trim38Q5SZ99 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim38Q5SZ99 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim38Q5SZ99 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim38Q5SZ99 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim38Q5SZ99 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim38Q5SZ99 Gm10418-201ENSMUST00000100943 576 ntBASIC18.41■□□□□ 0.54
Trim38Q5SZ99 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.41■□□□□ 0.54
Trim38Q5SZ99 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.41■□□□□ 0.54
Trim38Q5SZ99 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim38Q5SZ99 Idnk-204ENSMUST00000226010 1898 ntBASIC18.41■□□□□ 0.54
Trim38Q5SZ99 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Trim38Q5SZ99 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim38Q5SZ99 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim38Q5SZ99 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim38Q5SZ99 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.4■□□□□ 0.54
Trim38Q5SZ99 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim38Q5SZ99 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim38Q5SZ99 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim38Q5SZ99 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim38Q5SZ99 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim38Q5SZ99 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim38Q5SZ99 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim38Q5SZ99 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim38Q5SZ99 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim38Q5SZ99 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.4■□□□□ 0.54
Trim38Q5SZ99 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Trim38Q5SZ99 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim38Q5SZ99 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim38Q5SZ99 Gm2559-201ENSMUST00000201323 363 ntBASIC18.4■□□□□ 0.54
Trim38Q5SZ99 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim38Q5SZ99 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.4■□□□□ 0.54
Trim38Q5SZ99 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim38Q5SZ99 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim38Q5SZ99 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim38Q5SZ99 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Trim38Q5SZ99 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Trim38Q5SZ99 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Trim38Q5SZ99 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim38Q5SZ99 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim38Q5SZ99 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim38Q5SZ99 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim38Q5SZ99 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.39■□□□□ 0.53
Trim38Q5SZ99 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Trim38Q5SZ99 Gm11927-201ENSMUST00000118472 759 ntBASIC18.39■□□□□ 0.53
Trim38Q5SZ99 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim38Q5SZ99 Gm4968-201ENSMUST00000071458 858 ntBASIC18.39■□□□□ 0.53
Trim38Q5SZ99 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim38Q5SZ99 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim38Q5SZ99 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim38Q5SZ99 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim38Q5SZ99 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
Trim38Q5SZ99 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim38Q5SZ99 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim38Q5SZ99 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.39■□□□□ 0.53
Trim38Q5SZ99 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim38Q5SZ99 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Trim38Q5SZ99 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim38Q5SZ99 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim38Q5SZ99 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim38Q5SZ99 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.38■□□□□ 0.53
Trim38Q5SZ99 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim38Q5SZ99 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.38■□□□□ 0.53
Trim38Q5SZ99 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms