Protein–RNA interactions for Protein: Q5SUQ9

Ctc1, CST complex subunit CTC1, mousemouse

Predictions only

Length 1,212 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1Q5SUQ9 Gm11249-201ENSMUST00000117071 859 ntBASIC18.8■□□□□ 0.6
Ctc1Q5SUQ9 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Ctc1Q5SUQ9 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ctc1Q5SUQ9 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Ctc1Q5SUQ9 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ctc1Q5SUQ9 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ctc1Q5SUQ9 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Ctc1Q5SUQ9 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ctc1Q5SUQ9 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ctc1Q5SUQ9 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ctc1Q5SUQ9 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ctc1Q5SUQ9 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ctc1Q5SUQ9 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ctc1Q5SUQ9 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.79■□□□□ 0.6
Ctc1Q5SUQ9 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ctc1Q5SUQ9 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ctc1Q5SUQ9 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ctc1Q5SUQ9 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.79■□□□□ 0.6
Ctc1Q5SUQ9 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.79■□□□□ 0.6
Ctc1Q5SUQ9 Gm8969-201ENSMUST00000199694 526 ntBASIC18.79■□□□□ 0.6
Ctc1Q5SUQ9 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ctc1Q5SUQ9 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.79■□□□□ 0.6
Ctc1Q5SUQ9 Idnk-204ENSMUST00000226010 1898 ntBASIC18.79■□□□□ 0.6
Ctc1Q5SUQ9 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ctc1Q5SUQ9 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ctc1Q5SUQ9 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ctc1Q5SUQ9 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ctc1Q5SUQ9 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ctc1Q5SUQ9 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ctc1Q5SUQ9 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ctc1Q5SUQ9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ctc1Q5SUQ9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ctc1Q5SUQ9 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ctc1Q5SUQ9 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ctc1Q5SUQ9 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Ctc1Q5SUQ9 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Ctc1Q5SUQ9 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ctc1Q5SUQ9 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ctc1Q5SUQ9 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ctc1Q5SUQ9 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ctc1Q5SUQ9 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.78■□□□□ 0.6
Ctc1Q5SUQ9 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Ctc1Q5SUQ9 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Ctc1Q5SUQ9 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.78■□□□□ 0.6
Ctc1Q5SUQ9 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ctc1Q5SUQ9 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ctc1Q5SUQ9 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ctc1Q5SUQ9 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ctc1Q5SUQ9 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ctc1Q5SUQ9 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ctc1Q5SUQ9 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ctc1Q5SUQ9 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ctc1Q5SUQ9 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ctc1Q5SUQ9 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ctc1Q5SUQ9 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ctc1Q5SUQ9 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ctc1Q5SUQ9 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ctc1Q5SUQ9 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ctc1Q5SUQ9 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ctc1Q5SUQ9 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.77■□□□□ 0.6
Ctc1Q5SUQ9 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Ctc1Q5SUQ9 Gm15378-201ENSMUST00000121894 207 ntBASIC18.77■□□□□ 0.6
Ctc1Q5SUQ9 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.77■□□□□ 0.6
Ctc1Q5SUQ9 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ctc1Q5SUQ9 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.77■□□□□ 0.6
Ctc1Q5SUQ9 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ctc1Q5SUQ9 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ctc1Q5SUQ9 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ctc1Q5SUQ9 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ctc1Q5SUQ9 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ctc1Q5SUQ9 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ctc1Q5SUQ9 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ctc1Q5SUQ9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.76■□□□□ 0.59
Ctc1Q5SUQ9 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ctc1Q5SUQ9 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ctc1Q5SUQ9 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ctc1Q5SUQ9 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ctc1Q5SUQ9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Ctc1Q5SUQ9 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Ctc1Q5SUQ9 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ctc1Q5SUQ9 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Ctc1Q5SUQ9 Gm10698-201ENSMUST00000182663 604 ntBASIC18.76■□□□□ 0.59
Ctc1Q5SUQ9 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.76■□□□□ 0.59
Ctc1Q5SUQ9 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Ctc1Q5SUQ9 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ctc1Q5SUQ9 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ctc1Q5SUQ9 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ctc1Q5SUQ9 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ctc1Q5SUQ9 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ctc1Q5SUQ9 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ctc1Q5SUQ9 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ctc1Q5SUQ9 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ctc1Q5SUQ9 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.75■□□□□ 0.59
Ctc1Q5SUQ9 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ctc1Q5SUQ9 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ctc1Q5SUQ9 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ctc1Q5SUQ9 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.75■□□□□ 0.59
Ctc1Q5SUQ9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ctc1Q5SUQ9 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ctc1Q5SUQ9 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms