Protein–RNA interactions for Protein: Q3U1D0

Lins1, Protein Lines homolog 1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lins1Q3U1D0 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lins1Q3U1D0 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC21.18■□□□□ 0.98
Lins1Q3U1D0 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Lins1Q3U1D0 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC21.17■□□□□ 0.98
Lins1Q3U1D0 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lins1Q3U1D0 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC21.17■□□□□ 0.98
Lins1Q3U1D0 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC21.17■□□□□ 0.98
Lins1Q3U1D0 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lins1Q3U1D0 Mir2861-201ENSMUST00000175539 82 ntBASIC21.17■□□□□ 0.98
Lins1Q3U1D0 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lins1Q3U1D0 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Lins1Q3U1D0 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC21.17■□□□□ 0.98
Lins1Q3U1D0 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Lins1Q3U1D0 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lins1Q3U1D0 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lins1Q3U1D0 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Lins1Q3U1D0 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lins1Q3U1D0 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lins1Q3U1D0 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lins1Q3U1D0 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC21.16■□□□□ 0.98
Lins1Q3U1D0 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lins1Q3U1D0 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lins1Q3U1D0 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lins1Q3U1D0 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lins1Q3U1D0 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lins1Q3U1D0 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lins1Q3U1D0 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lins1Q3U1D0 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lins1Q3U1D0 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lins1Q3U1D0 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lins1Q3U1D0 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lins1Q3U1D0 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC21.15■□□□□ 0.98
Lins1Q3U1D0 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Lins1Q3U1D0 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lins1Q3U1D0 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Lins1Q3U1D0 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC21.15■□□□□ 0.98
Lins1Q3U1D0 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lins1Q3U1D0 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC21.15■□□□□ 0.98
Lins1Q3U1D0 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Lins1Q3U1D0 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lins1Q3U1D0 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Lins1Q3U1D0 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lins1Q3U1D0 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Lins1Q3U1D0 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Lins1Q3U1D0 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Lins1Q3U1D0 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Lins1Q3U1D0 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC21.14■□□□□ 0.97
Lins1Q3U1D0 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Lins1Q3U1D0 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lins1Q3U1D0 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lins1Q3U1D0 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lins1Q3U1D0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lins1Q3U1D0 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lins1Q3U1D0 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lins1Q3U1D0 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC21.13■□□□□ 0.97
Lins1Q3U1D0 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Lins1Q3U1D0 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lins1Q3U1D0 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lins1Q3U1D0 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lins1Q3U1D0 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lins1Q3U1D0 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
Lins1Q3U1D0 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Lins1Q3U1D0 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lins1Q3U1D0 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Lins1Q3U1D0 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lins1Q3U1D0 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lins1Q3U1D0 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
Lins1Q3U1D0 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Lins1Q3U1D0 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Lins1Q3U1D0 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Lins1Q3U1D0 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC21.12■□□□□ 0.97
Lins1Q3U1D0 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lins1Q3U1D0 Gm38345-201ENSMUST00000192635 1748 ntBASIC21.12■□□□□ 0.97
Lins1Q3U1D0 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Lins1Q3U1D0 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lins1Q3U1D0 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lins1Q3U1D0 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Lins1Q3U1D0 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lins1Q3U1D0 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lins1Q3U1D0 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC21.11■□□□□ 0.97
Lins1Q3U1D0 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC21.11■□□□□ 0.97
Lins1Q3U1D0 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lins1Q3U1D0 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Lins1Q3U1D0 Gm9194-201ENSMUST00000220749 1447 ntBASIC21.11■□□□□ 0.97
Lins1Q3U1D0 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lins1Q3U1D0 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC21.11■□□□□ 0.97
Lins1Q3U1D0 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lins1Q3U1D0 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Lins1Q3U1D0 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lins1Q3U1D0 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC21.1■□□□□ 0.97
Lins1Q3U1D0 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lins1Q3U1D0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lins1Q3U1D0 Gm45906-201ENSMUST00000208911 1430 ntBASIC21.1■□□□□ 0.97
Lins1Q3U1D0 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lins1Q3U1D0 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Lins1Q3U1D0 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Lins1Q3U1D0 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Lins1Q3U1D0 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Lins1Q3U1D0 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Lins1Q3U1D0 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms