Protein–RNA interactions for Protein: Q3TX51

Lrrc28, Leucine-rich repeat-containing protein 28, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc28Q3TX51 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lrrc28Q3TX51 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Lrrc28Q3TX51 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Lrrc28Q3TX51 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Lrrc28Q3TX51 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Lrrc28Q3TX51 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.28
Lrrc28Q3TX51 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Lrrc28Q3TX51 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lrrc28Q3TX51 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.82■□□□□ 0.28
Lrrc28Q3TX51 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.82■□□□□ 0.28
Lrrc28Q3TX51 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lrrc28Q3TX51 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.82■□□□□ 0.28
Lrrc28Q3TX51 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lrrc28Q3TX51 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lrrc28Q3TX51 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lrrc28Q3TX51 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.82■□□□□ 0.28
Lrrc28Q3TX51 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lrrc28Q3TX51 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.82■□□□□ 0.28
Lrrc28Q3TX51 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.82■□□□□ 0.28
Lrrc28Q3TX51 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lrrc28Q3TX51 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lrrc28Q3TX51 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lrrc28Q3TX51 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Lrrc28Q3TX51 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Lrrc28Q3TX51 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lrrc28Q3TX51 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lrrc28Q3TX51 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Lrrc28Q3TX51 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lrrc28Q3TX51 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lrrc28Q3TX51 Gm11643-201ENSMUST00000119578 864 ntBASIC16.81■□□□□ 0.28
Lrrc28Q3TX51 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lrrc28Q3TX51 Gm43799-201ENSMUST00000201845 579 ntBASIC16.81■□□□□ 0.28
Lrrc28Q3TX51 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lrrc28Q3TX51 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lrrc28Q3TX51 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lrrc28Q3TX51 Gm9987-201ENSMUST00000069768 567 ntBASIC16.81■□□□□ 0.28
Lrrc28Q3TX51 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lrrc28Q3TX51 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lrrc28Q3TX51 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lrrc28Q3TX51 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lrrc28Q3TX51 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lrrc28Q3TX51 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.8■□□□□ 0.28
Lrrc28Q3TX51 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Lrrc28Q3TX51 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lrrc28Q3TX51 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Lrrc28Q3TX51 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lrrc28Q3TX51 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Lrrc28Q3TX51 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Lrrc28Q3TX51 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lrrc28Q3TX51 Gm3375-201ENSMUST00000203929 796 ntBASIC16.8■□□□□ 0.28
Lrrc28Q3TX51 Gm30025-201ENSMUST00000218555 728 ntBASIC16.8■□□□□ 0.28
Lrrc28Q3TX51 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lrrc28Q3TX51 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lrrc28Q3TX51 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lrrc28Q3TX51 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lrrc28Q3TX51 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lrrc28Q3TX51 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lrrc28Q3TX51 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lrrc28Q3TX51 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lrrc28Q3TX51 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lrrc28Q3TX51 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Lrrc28Q3TX51 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lrrc28Q3TX51 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lrrc28Q3TX51 Gm6433-201ENSMUST00000118634 875 ntBASIC16.79■□□□□ 0.28
Lrrc28Q3TX51 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.79■□□□□ 0.28
Lrrc28Q3TX51 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.79■□□□□ 0.28
Lrrc28Q3TX51 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lrrc28Q3TX51 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lrrc28Q3TX51 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lrrc28Q3TX51 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lrrc28Q3TX51 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lrrc28Q3TX51 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lrrc28Q3TX51 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lrrc28Q3TX51 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lrrc28Q3TX51 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lrrc28Q3TX51 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lrrc28Q3TX51 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lrrc28Q3TX51 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lrrc28Q3TX51 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lrrc28Q3TX51 Tgds-204ENSMUST00000228543 1594 ntBASIC16.78■□□□□ 0.28
Lrrc28Q3TX51 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lrrc28Q3TX51 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lrrc28Q3TX51 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lrrc28Q3TX51 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lrrc28Q3TX51 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
Lrrc28Q3TX51 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Lrrc28Q3TX51 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lrrc28Q3TX51 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
Lrrc28Q3TX51 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
Lrrc28Q3TX51 Grk6-206ENSMUST00000224995 2971 ntBASIC16.77■□□□□ 0.28
Lrrc28Q3TX51 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lrrc28Q3TX51 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Lrrc28Q3TX51 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lrrc28Q3TX51 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lrrc28Q3TX51 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Lrrc28Q3TX51 Rarb-207ENSMUST00000225921 2756 ntBASIC16.77■□□□□ 0.27
Lrrc28Q3TX51 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.77■□□□□ 0.27
Lrrc28Q3TX51 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lrrc28Q3TX51 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Lrrc28Q3TX51 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms