Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Gm7291-201ENSMUST00000199147 382 ntBASIC18.67■□□□□ 0.58
Cul4aQ3TCH7 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cul4aQ3TCH7 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cul4aQ3TCH7 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cul4aQ3TCH7 Gm6365-201ENSMUST00000054711 744 ntBASIC18.67■□□□□ 0.58
Cul4aQ3TCH7 Gm5874-201ENSMUST00000096101 508 ntBASIC18.67■□□□□ 0.58
Cul4aQ3TCH7 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Cul4aQ3TCH7 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cul4aQ3TCH7 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cul4aQ3TCH7 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Cul4aQ3TCH7 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cul4aQ3TCH7 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cul4aQ3TCH7 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cul4aQ3TCH7 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cul4aQ3TCH7 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cul4aQ3TCH7 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cul4aQ3TCH7 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cul4aQ3TCH7 Gm10849-201ENSMUST00000100397 618 ntBASIC18.66■□□□□ 0.58
Cul4aQ3TCH7 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cul4aQ3TCH7 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cul4aQ3TCH7 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.66■□□□□ 0.58
Cul4aQ3TCH7 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cul4aQ3TCH7 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.66■□□□□ 0.58
Cul4aQ3TCH7 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cul4aQ3TCH7 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cul4aQ3TCH7 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cul4aQ3TCH7 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cul4aQ3TCH7 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cul4aQ3TCH7 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.66■□□□□ 0.58
Cul4aQ3TCH7 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.66■□□□□ 0.58
Cul4aQ3TCH7 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Cul4aQ3TCH7 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cul4aQ3TCH7 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cul4aQ3TCH7 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cul4aQ3TCH7 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cul4aQ3TCH7 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cul4aQ3TCH7 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cul4aQ3TCH7 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cul4aQ3TCH7 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.65■□□□□ 0.58
Cul4aQ3TCH7 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cul4aQ3TCH7 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cul4aQ3TCH7 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Cul4aQ3TCH7 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cul4aQ3TCH7 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cul4aQ3TCH7 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Cul4aQ3TCH7 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cul4aQ3TCH7 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cul4aQ3TCH7 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cul4aQ3TCH7 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.64■□□□□ 0.57
Cul4aQ3TCH7 Mir8112-201ENSMUST00000184382 131 ntBASIC18.64■□□□□ 0.57
Cul4aQ3TCH7 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cul4aQ3TCH7 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cul4aQ3TCH7 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cul4aQ3TCH7 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cul4aQ3TCH7 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cul4aQ3TCH7 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cul4aQ3TCH7 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cul4aQ3TCH7 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cul4aQ3TCH7 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Cul4aQ3TCH7 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cul4aQ3TCH7 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cul4aQ3TCH7 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cul4aQ3TCH7 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.63■□□□□ 0.57
Cul4aQ3TCH7 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cul4aQ3TCH7 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Cul4aQ3TCH7 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.63■□□□□ 0.57
Cul4aQ3TCH7 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.63■□□□□ 0.57
Cul4aQ3TCH7 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cul4aQ3TCH7 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cul4aQ3TCH7 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.63■□□□□ 0.57
Cul4aQ3TCH7 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cul4aQ3TCH7 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Cul4aQ3TCH7 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cul4aQ3TCH7 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cul4aQ3TCH7 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cul4aQ3TCH7 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cul4aQ3TCH7 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cul4aQ3TCH7 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cul4aQ3TCH7 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cul4aQ3TCH7 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.62■□□□□ 0.57
Cul4aQ3TCH7 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Cul4aQ3TCH7 Gm7290-201ENSMUST00000104990 617 ntBASIC18.62■□□□□ 0.57
Cul4aQ3TCH7 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cul4aQ3TCH7 Gm12918-201ENSMUST00000120234 636 ntBASIC18.62■□□□□ 0.57
Cul4aQ3TCH7 Gm15710-201ENSMUST00000121821 636 ntBASIC18.62■□□□□ 0.57
Cul4aQ3TCH7 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cul4aQ3TCH7 Gm5075-201ENSMUST00000196916 622 ntBASIC18.62■□□□□ 0.57
Cul4aQ3TCH7 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.62■□□□□ 0.57
Cul4aQ3TCH7 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.62■□□□□ 0.57
Cul4aQ3TCH7 Zfp783-201ENSMUST00000095946 670 ntBASIC18.62■□□□□ 0.57
Cul4aQ3TCH7 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cul4aQ3TCH7 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cul4aQ3TCH7 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cul4aQ3TCH7 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cul4aQ3TCH7 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.62■□□□□ 0.57
Cul4aQ3TCH7 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cul4aQ3TCH7 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cul4aQ3TCH7 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Cul4aQ3TCH7 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cul4aQ3TCH7 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms