Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nkx3-2P97503 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nkx3-2P97503 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nkx3-2P97503 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nkx3-2P97503 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nkx3-2P97503 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.77■□□□□ 0.27
Nkx3-2P97503 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
Nkx3-2P97503 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nkx3-2P97503 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx3-2P97503 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx3-2P97503 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx3-2P97503 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx3-2P97503 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Nkx3-2P97503 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx3-2P97503 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx3-2P97503 Gm15375-201ENSMUST00000119510 849 ntBASIC16.76■□□□□ 0.27
Nkx3-2P97503 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.76■□□□□ 0.27
Nkx3-2P97503 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx3-2P97503 Mir6349-201ENSMUST00000184059 97 ntBASIC16.76■□□□□ 0.27
Nkx3-2P97503 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx3-2P97503 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.76■□□□□ 0.27
Nkx3-2P97503 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx3-2P97503 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx3-2P97503 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx3-2P97503 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Nkx3-2P97503 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx3-2P97503 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx3-2P97503 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx3-2P97503 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.75■□□□□ 0.27
Nkx3-2P97503 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx3-2P97503 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx3-2P97503 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx3-2P97503 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx3-2P97503 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.75■□□□□ 0.27
Nkx3-2P97503 Mir6982-201ENSMUST00000184354 68 ntBASIC16.75■□□□□ 0.27
Nkx3-2P97503 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.75■□□□□ 0.27
Nkx3-2P97503 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx3-2P97503 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Nkx3-2P97503 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.75■□□□□ 0.27
Nkx3-2P97503 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.75■□□□□ 0.27
Nkx3-2P97503 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx3-2P97503 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.75■□□□□ 0.27
Nkx3-2P97503 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.75■□□□□ 0.27
Nkx3-2P97503 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.75■□□□□ 0.27
Nkx3-2P97503 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx3-2P97503 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx3-2P97503 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Nkx3-2P97503 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Nkx3-2P97503 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Nkx3-2P97503 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx3-2P97503 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx3-2P97503 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.74■□□□□ 0.27
Nkx3-2P97503 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Nkx3-2P97503 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx3-2P97503 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.74■□□□□ 0.27
Nkx3-2P97503 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
Nkx3-2P97503 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.74■□□□□ 0.27
Nkx3-2P97503 Mtag2-201ENSMUST00000058665 714 ntBASIC16.74■□□□□ 0.27
Nkx3-2P97503 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx3-2P97503 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx3-2P97503 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx3-2P97503 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx3-2P97503 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx3-2P97503 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx3-2P97503 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Nkx3-2P97503 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.73■□□□□ 0.27
Nkx3-2P97503 Fst-202ENSMUST00000223640 2612 ntBASIC16.73■□□□□ 0.27
Nkx3-2P97503 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx3-2P97503 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx3-2P97503 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx3-2P97503 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.73■□□□□ 0.27
Nkx3-2P97503 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Nkx3-2P97503 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx3-2P97503 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.73■□□□□ 0.27
Nkx3-2P97503 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Nkx3-2P97503 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.73■□□□□ 0.27
Nkx3-2P97503 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.73■□□□□ 0.27
Nkx3-2P97503 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Nkx3-2P97503 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx3-2P97503 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx3-2P97503 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx3-2P97503 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx3-2P97503 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx3-2P97503 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Nkx3-2P97503 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx3-2P97503 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx3-2P97503 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.72■□□□□ 0.27
Nkx3-2P97503 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx3-2P97503 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx3-2P97503 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Nkx3-2P97503 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.72■□□□□ 0.27
Nkx3-2P97503 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx3-2P97503 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.72■□□□□ 0.27
Nkx3-2P97503 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx3-2P97503 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx3-2P97503 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.71■□□□□ 0.27
Nkx3-2P97503 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx3-2P97503 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.71■□□□□ 0.27
Nkx3-2P97503 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.71■□□□□ 0.27
Nkx3-2P97503 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms