Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
PrkdcP97313 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
PrkdcP97313 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PrkdcP97313 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC12.24□□□□□ -0.45
PrkdcP97313 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.24□□□□□ -0.45
PrkdcP97313 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PrkdcP97313 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PrkdcP97313 AC126028.2-201ENSMUST00000228100 1833 ntBASIC12.24□□□□□ -0.45
PrkdcP97313 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
PrkdcP97313 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
PrkdcP97313 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PrkdcP97313 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PrkdcP97313 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC12.24□□□□□ -0.45
PrkdcP97313 Gm11355-201ENSMUST00000121120 306 ntBASIC12.24□□□□□ -0.45
PrkdcP97313 Gm12895-201ENSMUST00000122214 226 ntBASIC12.24□□□□□ -0.45
PrkdcP97313 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
PrkdcP97313 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PrkdcP97313 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
PrkdcP97313 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
PrkdcP97313 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
PrkdcP97313 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
PrkdcP97313 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC12.23□□□□□ -0.45
PrkdcP97313 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
PrkdcP97313 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
PrkdcP97313 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.23□□□□□ -0.45
PrkdcP97313 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC12.23□□□□□ -0.45
PrkdcP97313 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PrkdcP97313 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PrkdcP97313 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
PrkdcP97313 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PrkdcP97313 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PrkdcP97313 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
PrkdcP97313 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
PrkdcP97313 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
PrkdcP97313 AC124569.2-201ENSMUST00000225998 818 ntBASIC12.23□□□□□ -0.45
PrkdcP97313 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PrkdcP97313 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PrkdcP97313 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PrkdcP97313 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PrkdcP97313 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
PrkdcP97313 Gm5364-201ENSMUST00000216789 889 ntBASIC12.23□□□□□ -0.45
PrkdcP97313 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PrkdcP97313 Gm14822-201ENSMUST00000122247 291 ntBASIC12.22□□□□□ -0.45
PrkdcP97313 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
PrkdcP97313 Cxcl14-202ENSMUST00000224801 1467 ntBASIC12.22□□□□□ -0.45
PrkdcP97313 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PrkdcP97313 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PrkdcP97313 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC12.22□□□□□ -0.45
PrkdcP97313 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PrkdcP97313 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PrkdcP97313 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
PrkdcP97313 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
PrkdcP97313 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PrkdcP97313 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
PrkdcP97313 Gm1401-201ENSMUST00000122048 772 ntBASIC12.22□□□□□ -0.45
PrkdcP97313 Mir5131-201ENSMUST00000175426 93 ntBASIC12.22□□□□□ -0.45
PrkdcP97313 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.22□□□□□ -0.45
PrkdcP97313 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PrkdcP97313 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PrkdcP97313 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC12.22□□□□□ -0.45
PrkdcP97313 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
PrkdcP97313 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PrkdcP97313 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
PrkdcP97313 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PrkdcP97313 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PrkdcP97313 Gm10052-201ENSMUST00000168019 960 ntBASIC12.22□□□□□ -0.45
PrkdcP97313 Gm44357-201ENSMUST00000195897 142 ntBASIC12.22□□□□□ -0.45
PrkdcP97313 Gm19658-201ENSMUST00000196231 138 ntBASIC12.22□□□□□ -0.45
PrkdcP97313 Gm44367-201ENSMUST00000196836 138 ntBASIC12.22□□□□□ -0.45
PrkdcP97313 Gm44350-201ENSMUST00000197197 138 ntBASIC12.22□□□□□ -0.45
PrkdcP97313 Gm44390-201ENSMUST00000197533 144 ntBASIC12.22□□□□□ -0.45
PrkdcP97313 Gm44313-201ENSMUST00000198018 138 ntBASIC12.22□□□□□ -0.45
PrkdcP97313 Gm44486-201ENSMUST00000198508 138 ntBASIC12.22□□□□□ -0.45
PrkdcP97313 Gm44454-201ENSMUST00000198541 138 ntBASIC12.22□□□□□ -0.45
PrkdcP97313 Gm44314-201ENSMUST00000199263 138 ntBASIC12.22□□□□□ -0.45
PrkdcP97313 Gm44394-201ENSMUST00000199558 138 ntBASIC12.22□□□□□ -0.45
PrkdcP97313 Gm44484-201ENSMUST00000199873 138 ntBASIC12.22□□□□□ -0.45
PrkdcP97313 Gm44466-201ENSMUST00000200264 138 ntBASIC12.22□□□□□ -0.45
PrkdcP97313 Gm44359-201ENSMUST00000200671 138 ntBASIC12.22□□□□□ -0.45
PrkdcP97313 Gm7729-201ENSMUST00000050143 801 ntBASIC12.22□□□□□ -0.45
PrkdcP97313 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PrkdcP97313 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
PrkdcP97313 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PrkdcP97313 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PrkdcP97313 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
PrkdcP97313 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PrkdcP97313 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PrkdcP97313 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PrkdcP97313 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PrkdcP97313 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PrkdcP97313 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PrkdcP97313 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PrkdcP97313 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
PrkdcP97313 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
PrkdcP97313 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
PrkdcP97313 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
PrkdcP97313 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
PrkdcP97313 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
PrkdcP97313 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
PrkdcP97313 AC138767.1-201ENSMUST00000222661 415 ntBASIC12.21□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms