Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SgcaP82350 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SgcaP82350 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
SgcaP82350 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SgcaP82350 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SgcaP82350 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SgcaP82350 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SgcaP82350 Gm43672-201ENSMUST00000199072 1731 ntBASIC14.89□□□□□ -0.03
SgcaP82350 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SgcaP82350 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SgcaP82350 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SgcaP82350 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SgcaP82350 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SgcaP82350 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SgcaP82350 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SgcaP82350 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SgcaP82350 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
SgcaP82350 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SgcaP82350 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SgcaP82350 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC14.88□□□□□ -0.03
SgcaP82350 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC14.88□□□□□ -0.03
SgcaP82350 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SgcaP82350 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SgcaP82350 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SgcaP82350 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SgcaP82350 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SgcaP82350 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SgcaP82350 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SgcaP82350 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SgcaP82350 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SgcaP82350 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SgcaP82350 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SgcaP82350 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SgcaP82350 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SgcaP82350 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SgcaP82350 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SgcaP82350 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SgcaP82350 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SgcaP82350 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
SgcaP82350 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SgcaP82350 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
SgcaP82350 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SgcaP82350 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SgcaP82350 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC14.87□□□□□ -0.03
SgcaP82350 Gm8969-201ENSMUST00000199694 526 ntBASIC14.87□□□□□ -0.03
SgcaP82350 CT030146.1-201ENSMUST00000220919 217 ntBASIC14.87□□□□□ -0.03
SgcaP82350 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SgcaP82350 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SgcaP82350 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SgcaP82350 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SgcaP82350 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SgcaP82350 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SgcaP82350 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SgcaP82350 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SgcaP82350 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SgcaP82350 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SgcaP82350 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SgcaP82350 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SgcaP82350 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SgcaP82350 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
SgcaP82350 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SgcaP82350 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SgcaP82350 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.86□□□□□ -0.03
SgcaP82350 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SgcaP82350 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SgcaP82350 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
SgcaP82350 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC14.86□□□□□ -0.03
SgcaP82350 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SgcaP82350 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SgcaP82350 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SgcaP82350 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
SgcaP82350 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SgcaP82350 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SgcaP82350 Gm11421-201ENSMUST00000122124 294 ntBASIC14.86□□□□□ -0.03
SgcaP82350 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC14.86□□□□□ -0.03
SgcaP82350 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC14.86□□□□□ -0.03
SgcaP82350 Gm37805-201ENSMUST00000192612 1094 ntBASIC14.86□□□□□ -0.03
SgcaP82350 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SgcaP82350 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SgcaP82350 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SgcaP82350 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SgcaP82350 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SgcaP82350 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SgcaP82350 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SgcaP82350 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
SgcaP82350 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SgcaP82350 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SgcaP82350 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SgcaP82350 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SgcaP82350 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SgcaP82350 Gm12922-201ENSMUST00000120626 809 ntBASIC14.85□□□□□ -0.03
SgcaP82350 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC14.85□□□□□ -0.03
SgcaP82350 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SgcaP82350 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC14.85□□□□□ -0.03
SgcaP82350 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SgcaP82350 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SgcaP82350 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SgcaP82350 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SgcaP82350 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SgcaP82350 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms