Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.23■□□□□ 0.51
Ybx1P62960 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ybx1P62960 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ybx1P62960 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ybx1P62960 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ybx1P62960 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ybx1P62960 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ybx1P62960 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ybx1P62960 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ybx1P62960 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ybx1P62960 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ybx1P62960 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ybx1P62960 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ybx1P62960 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ybx1P62960 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
Ybx1P62960 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ybx1P62960 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ybx1P62960 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ybx1P62960 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ybx1P62960 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ybx1P62960 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ybx1P62960 Gm38027-201ENSMUST00000192315 235 ntBASIC18.22■□□□□ 0.51
Ybx1P62960 Gm45058-201ENSMUST00000205810 766 ntBASIC18.22■□□□□ 0.51
Ybx1P62960 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ybx1P62960 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ybx1P62960 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ybx1P62960 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ybx1P62960 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Ybx1P62960 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.21■□□□□ 0.51
Ybx1P62960 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.21■□□□□ 0.51
Ybx1P62960 Gm27463-201ENSMUST00000183569 57 ntBASIC18.21■□□□□ 0.51
Ybx1P62960 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ybx1P62960 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ybx1P62960 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.21■□□□□ 0.51
Ybx1P62960 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Ybx1P62960 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ybx1P62960 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ybx1P62960 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ybx1P62960 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ybx1P62960 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.2■□□□□ 0.5
Ybx1P62960 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ybx1P62960 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ybx1P62960 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ybx1P62960 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Ybx1P62960 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ybx1P62960 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.19■□□□□ 0.5
Ybx1P62960 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ybx1P62960 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.19■□□□□ 0.5
Ybx1P62960 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ybx1P62960 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ybx1P62960 Gm10013-201ENSMUST00000106074 672 ntBASIC18.19■□□□□ 0.5
Ybx1P62960 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ybx1P62960 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ybx1P62960 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ybx1P62960 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ybx1P62960 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ybx1P62960 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
Ybx1P62960 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.19■□□□□ 0.5
Ybx1P62960 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ybx1P62960 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ybx1P62960 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ybx1P62960 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.19■□□□□ 0.5
Ybx1P62960 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ybx1P62960 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ybx1P62960 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ybx1P62960 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Ybx1P62960 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Ybx1P62960 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ybx1P62960 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Ybx1P62960 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Ybx1P62960 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.18■□□□□ 0.5
Ybx1P62960 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ybx1P62960 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ybx1P62960 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ybx1P62960 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.18■□□□□ 0.5
Ybx1P62960 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.18■□□□□ 0.5
Ybx1P62960 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ybx1P62960 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Ybx1P62960 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ybx1P62960 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ybx1P62960 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.18■□□□□ 0.5
Ybx1P62960 Gm6345-202ENSMUST00000180900 204 ntBASIC18.18■□□□□ 0.5
Ybx1P62960 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.18■□□□□ 0.5
Ybx1P62960 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.18■□□□□ 0.5
Ybx1P62960 Grk6-206ENSMUST00000224995 2971 ntBASIC18.18■□□□□ 0.5
Ybx1P62960 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ybx1P62960 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ybx1P62960 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ybx1P62960 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ybx1P62960 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Ybx1P62960 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.17■□□□□ 0.5
Ybx1P62960 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ybx1P62960 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ybx1P62960 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ybx1P62960 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ybx1P62960 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ybx1P62960 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ybx1P62960 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.17■□□□□ 0.5
Ybx1P62960 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Ybx1P62960 Mir5130-201ENSMUST00000175160 84 ntBASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms