Protein–RNA interactions for Protein: P56484

Ccr8, C-C chemokine receptor type 8, mousemouse

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr8P56484 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC15.28■□□□□ 0.04
Ccr8P56484 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccr8P56484 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccr8P56484 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.28■□□□□ 0.04
Ccr8P56484 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.28■□□□□ 0.04
Ccr8P56484 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccr8P56484 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccr8P56484 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ccr8P56484 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccr8P56484 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ccr8P56484 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccr8P56484 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccr8P56484 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccr8P56484 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.27■□□□□ 0.04
Ccr8P56484 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccr8P56484 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccr8P56484 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccr8P56484 Gm11927-201ENSMUST00000118472 759 ntBASIC15.27■□□□□ 0.04
Ccr8P56484 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Ccr8P56484 Gm12441-201ENSMUST00000121806 588 ntBASIC15.27■□□□□ 0.04
Ccr8P56484 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Ccr8P56484 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC15.27■□□□□ 0.04
Ccr8P56484 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccr8P56484 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccr8P56484 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccr8P56484 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.27■□□□□ 0.03
Ccr8P56484 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccr8P56484 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccr8P56484 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccr8P56484 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccr8P56484 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccr8P56484 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.26■□□□□ 0.03
Ccr8P56484 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccr8P56484 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ccr8P56484 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccr8P56484 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccr8P56484 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccr8P56484 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccr8P56484 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccr8P56484 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ccr8P56484 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Ccr8P56484 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC15.26■□□□□ 0.03
Ccr8P56484 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC15.26■□□□□ 0.03
Ccr8P56484 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.26■□□□□ 0.03
Ccr8P56484 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccr8P56484 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccr8P56484 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccr8P56484 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ccr8P56484 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.26■□□□□ 0.03
Ccr8P56484 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Ccr8P56484 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccr8P56484 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccr8P56484 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccr8P56484 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccr8P56484 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccr8P56484 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ccr8P56484 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccr8P56484 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccr8P56484 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ccr8P56484 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.25■□□□□ 0.03
Ccr8P56484 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccr8P56484 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccr8P56484 Gm12896-201ENSMUST00000118430 226 ntBASIC15.25■□□□□ 0.03
Ccr8P56484 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccr8P56484 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ccr8P56484 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Ccr8P56484 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccr8P56484 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Ccr8P56484 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.25■□□□□ 0.03
Ccr8P56484 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccr8P56484 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ccr8P56484 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccr8P56484 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Ccr8P56484 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccr8P56484 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccr8P56484 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ccr8P56484 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccr8P56484 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccr8P56484 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccr8P56484 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccr8P56484 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccr8P56484 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC15.24■□□□□ 0.03
Ccr8P56484 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccr8P56484 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.24■□□□□ 0.03
Ccr8P56484 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccr8P56484 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccr8P56484 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ccr8P56484 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccr8P56484 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Ccr8P56484 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ccr8P56484 Dio3-201ENSMUST00000097228 1449 ntBASIC15.24■□□□□ 0.03
Ccr8P56484 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ccr8P56484 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Ccr8P56484 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccr8P56484 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccr8P56484 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.23■□□□□ 0.03
Ccr8P56484 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.23■□□□□ 0.03
Ccr8P56484 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccr8P56484 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccr8P56484 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms