Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cdh11P55288 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdh11P55288 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdh11P55288 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cdh11P55288 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdh11P55288 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cdh11P55288 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdh11P55288 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.19■□□□□ 0.18
Cdh11P55288 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdh11P55288 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdh11P55288 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cdh11P55288 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Cdh11P55288 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdh11P55288 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdh11P55288 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.19■□□□□ 0.18
Cdh11P55288 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.19■□□□□ 0.18
Cdh11P55288 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdh11P55288 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdh11P55288 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh11P55288 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh11P55288 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh11P55288 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh11P55288 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh11P55288 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh11P55288 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh11P55288 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh11P55288 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Cdh11P55288 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Cdh11P55288 Gm12441-201ENSMUST00000121806 588 ntBASIC16.18■□□□□ 0.18
Cdh11P55288 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh11P55288 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Cdh11P55288 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh11P55288 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh11P55288 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh11P55288 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Cdh11P55288 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh11P55288 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh11P55288 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh11P55288 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Cdh11P55288 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.17■□□□□ 0.18
Cdh11P55288 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.17■□□□□ 0.18
Cdh11P55288 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.17■□□□□ 0.18
Cdh11P55288 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh11P55288 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh11P55288 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.17■□□□□ 0.18
Cdh11P55288 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh11P55288 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh11P55288 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Cdh11P55288 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Cdh11P55288 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh11P55288 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh11P55288 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.16■□□□□ 0.18
Cdh11P55288 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh11P55288 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh11P55288 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh11P55288 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Cdh11P55288 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh11P55288 Gm6211-202ENSMUST00000167849 925 ntBASIC16.16■□□□□ 0.18
Cdh11P55288 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh11P55288 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.16■□□□□ 0.18
Cdh11P55288 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh11P55288 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh11P55288 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh11P55288 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh11P55288 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh11P55288 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh11P55288 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh11P55288 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh11P55288 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh11P55288 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh11P55288 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.15■□□□□ 0.18
Cdh11P55288 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh11P55288 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh11P55288 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh11P55288 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh11P55288 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Cdh11P55288 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh11P55288 Gm13148-201ENSMUST00000118892 745 ntBASIC16.15■□□□□ 0.18
Cdh11P55288 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Cdh11P55288 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.15■□□□□ 0.18
Cdh11P55288 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.15■□□□□ 0.18
Cdh11P55288 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh11P55288 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh11P55288 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh11P55288 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Cdh11P55288 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh11P55288 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Cdh11P55288 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh11P55288 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh11P55288 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Cdh11P55288 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Cdh11P55288 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh11P55288 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh11P55288 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.14■□□□□ 0.17
Cdh11P55288 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Cdh11P55288 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh11P55288 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.14■□□□□ 0.17
Cdh11P55288 Gm8969-201ENSMUST00000199694 526 ntBASIC16.14■□□□□ 0.17
Cdh11P55288 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.14■□□□□ 0.17
Cdh11P55288 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms