Protein–RNA interactions for Protein: P54285

Cacnb3, Voltage-dependent L-type calcium channel subunit beta-3, mousemouse

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb3P54285 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cacnb3P54285 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Cacnb3P54285 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Cacnb3P54285 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cacnb3P54285 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cacnb3P54285 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cacnb3P54285 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cacnb3P54285 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cacnb3P54285 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cacnb3P54285 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Cacnb3P54285 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cacnb3P54285 Golph3-205ENSMUST00000228671 2842 ntBASIC20.74■□□□□ 0.91
Cacnb3P54285 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.74■□□□□ 0.91
Cacnb3P54285 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cacnb3P54285 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cacnb3P54285 Gm33142-201ENSMUST00000193913 867 ntBASIC20.74■□□□□ 0.91
Cacnb3P54285 Gm7791-201ENSMUST00000219066 539 ntBASIC20.74■□□□□ 0.91
Cacnb3P54285 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cacnb3P54285 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cacnb3P54285 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
Cacnb3P54285 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cacnb3P54285 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cacnb3P54285 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Cacnb3P54285 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cacnb3P54285 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cacnb3P54285 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cacnb3P54285 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cacnb3P54285 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cacnb3P54285 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
Cacnb3P54285 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cacnb3P54285 Gm7638-201ENSMUST00000121348 967 ntBASIC20.73■□□□□ 0.91
Cacnb3P54285 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cacnb3P54285 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.73■□□□□ 0.91
Cacnb3P54285 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC20.73■□□□□ 0.91
Cacnb3P54285 Gm18101-201ENSMUST00000215769 548 ntBASIC20.73■□□□□ 0.91
Cacnb3P54285 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cacnb3P54285 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cacnb3P54285 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cacnb3P54285 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cacnb3P54285 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cacnb3P54285 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cacnb3P54285 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cacnb3P54285 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cacnb3P54285 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cacnb3P54285 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.72■□□□□ 0.91
Cacnb3P54285 Gm24841-201ENSMUST00000158676 357 ntBASIC20.72■□□□□ 0.91
Cacnb3P54285 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.72■□□□□ 0.91
Cacnb3P54285 AC134329.2-201ENSMUST00000217897 428 ntBASIC20.72■□□□□ 0.91
Cacnb3P54285 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cacnb3P54285 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cacnb3P54285 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cacnb3P54285 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cacnb3P54285 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cacnb3P54285 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cacnb3P54285 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cacnb3P54285 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Cacnb3P54285 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cacnb3P54285 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cacnb3P54285 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cacnb3P54285 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cacnb3P54285 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cacnb3P54285 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.71■□□□□ 0.91
Cacnb3P54285 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cacnb3P54285 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cacnb3P54285 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cacnb3P54285 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cacnb3P54285 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cacnb3P54285 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC20.71■□□□□ 0.91
Cacnb3P54285 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.7■□□□□ 0.91
Cacnb3P54285 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cacnb3P54285 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.7■□□□□ 0.9
Cacnb3P54285 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cacnb3P54285 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cacnb3P54285 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cacnb3P54285 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cacnb3P54285 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cacnb3P54285 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cacnb3P54285 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cacnb3P54285 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cacnb3P54285 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cacnb3P54285 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacnb3P54285 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cacnb3P54285 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacnb3P54285 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacnb3P54285 Fst-202ENSMUST00000223640 2612 ntBASIC20.69■□□□□ 0.9
Cacnb3P54285 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cacnb3P54285 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Cacnb3P54285 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacnb3P54285 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacnb3P54285 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacnb3P54285 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacnb3P54285 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacnb3P54285 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacnb3P54285 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacnb3P54285 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacnb3P54285 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacnb3P54285 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacnb3P54285 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacnb3P54285 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacnb3P54285 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms