Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm2274-201ENSMUST00000184539 609 ntBASIC22.62■■□□□ 1.21
Msh6P54276 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Msh6P54276 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Msh6P54276 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Msh6P54276 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Msh6P54276 Gm37374-201ENSMUST00000194954 1829 ntBASIC22.62■■□□□ 1.21
Msh6P54276 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Msh6P54276 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC22.61■■□□□ 1.21
Msh6P54276 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Msh6P54276 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Msh6P54276 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Msh6P54276 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
Msh6P54276 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Msh6P54276 AC123834.2-201ENSMUST00000224038 2340 ntBASIC22.61■■□□□ 1.21
Msh6P54276 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Msh6P54276 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
Msh6P54276 Gm9103-201ENSMUST00000119371 405 ntBASIC22.61■■□□□ 1.21
Msh6P54276 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Msh6P54276 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Msh6P54276 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Msh6P54276 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Msh6P54276 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Msh6P54276 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Msh6P54276 Gm18101-201ENSMUST00000215769 548 ntBASIC22.6■■□□□ 1.21
Msh6P54276 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC22.6■■□□□ 1.21
Msh6P54276 AC154471.1-201ENSMUST00000224418 436 ntBASIC22.6■■□□□ 1.21
Msh6P54276 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC22.6■■□□□ 1.21
Msh6P54276 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Msh6P54276 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Msh6P54276 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Msh6P54276 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC22.59■■□□□ 1.21
Msh6P54276 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC22.59■■□□□ 1.21
Msh6P54276 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
Msh6P54276 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
Msh6P54276 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC22.59■■□□□ 1.21
Msh6P54276 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Msh6P54276 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Msh6P54276 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Msh6P54276 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Msh6P54276 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Msh6P54276 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Msh6P54276 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Msh6P54276 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
Msh6P54276 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Msh6P54276 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Msh6P54276 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Msh6P54276 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Msh6P54276 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Msh6P54276 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Msh6P54276 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC22.58■■□□□ 1.21
Msh6P54276 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
Msh6P54276 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
Msh6P54276 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Msh6P54276 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Msh6P54276 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Msh6P54276 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Msh6P54276 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Msh6P54276 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Msh6P54276 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
Msh6P54276 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Msh6P54276 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Msh6P54276 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC22.57■■□□□ 1.2
Msh6P54276 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Msh6P54276 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Msh6P54276 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Msh6P54276 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Msh6P54276 Fst-202ENSMUST00000223640 2612 ntBASIC22.57■■□□□ 1.2
Msh6P54276 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Msh6P54276 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Msh6P54276 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC22.57■■□□□ 1.2
Msh6P54276 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Msh6P54276 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Msh6P54276 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Msh6P54276 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Msh6P54276 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Msh6P54276 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Msh6P54276 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Msh6P54276 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Msh6P54276 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Msh6P54276 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Msh6P54276 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC22.56■■□□□ 1.2
Msh6P54276 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Msh6P54276 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC22.56■■□□□ 1.2
Msh6P54276 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC22.56■■□□□ 1.2
Msh6P54276 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Msh6P54276 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Msh6P54276 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Msh6P54276 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC22.56■■□□□ 1.2
Msh6P54276 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Msh6P54276 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Msh6P54276 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Msh6P54276 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Msh6P54276 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Msh6P54276 Gm22697-201ENSMUST00000175194 63 ntBASIC22.55■■□□□ 1.2
Msh6P54276 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC22.55■■□□□ 1.2
Msh6P54276 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Msh6P54276 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Msh6P54276 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Msh6P54276 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC22.55■■□□□ 1.2
Msh6P54276 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms