Protein–RNA interactions for Protein: P50586

Tub, Tubby protein, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TubP50586 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TubP50586 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
TubP50586 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TubP50586 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.19■□□□□ 0.5
TubP50586 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TubP50586 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TubP50586 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.19■□□□□ 0.5
TubP50586 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TubP50586 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TubP50586 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TubP50586 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TubP50586 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TubP50586 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TubP50586 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TubP50586 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.19■□□□□ 0.5
TubP50586 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TubP50586 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.19■□□□□ 0.5
TubP50586 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.18■□□□□ 0.5
TubP50586 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TubP50586 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.18■□□□□ 0.5
TubP50586 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TubP50586 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TubP50586 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.18■□□□□ 0.5
TubP50586 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TubP50586 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TubP50586 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TubP50586 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TubP50586 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TubP50586 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.18■□□□□ 0.5
TubP50586 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.18■□□□□ 0.5
TubP50586 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
TubP50586 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.18■□□□□ 0.5
TubP50586 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.18■□□□□ 0.5
TubP50586 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TubP50586 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TubP50586 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TubP50586 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TubP50586 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TubP50586 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TubP50586 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TubP50586 Grk6-206ENSMUST00000224995 2971 ntBASIC18.18■□□□□ 0.5
TubP50586 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TubP50586 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TubP50586 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TubP50586 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TubP50586 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TubP50586 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TubP50586 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.17■□□□□ 0.5
TubP50586 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TubP50586 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TubP50586 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TubP50586 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TubP50586 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TubP50586 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TubP50586 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.17■□□□□ 0.5
TubP50586 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.17■□□□□ 0.5
TubP50586 Gm10812-201ENSMUST00000099864 546 ntBASIC18.17■□□□□ 0.5
TubP50586 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TubP50586 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.17■□□□□ 0.5
TubP50586 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TubP50586 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.17■□□□□ 0.5
TubP50586 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TubP50586 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TubP50586 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.17■□□□□ 0.5
TubP50586 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TubP50586 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TubP50586 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TubP50586 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TubP50586 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TubP50586 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TubP50586 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.16■□□□□ 0.5
TubP50586 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TubP50586 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
TubP50586 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TubP50586 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TubP50586 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TubP50586 Gm43183-201ENSMUST00000200632 547 ntBASIC18.16■□□□□ 0.5
TubP50586 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TubP50586 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.16■□□□□ 0.5
TubP50586 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TubP50586 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.16■□□□□ 0.5
TubP50586 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TubP50586 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TubP50586 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.15■□□□□ 0.5
TubP50586 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TubP50586 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.15■□□□□ 0.5
TubP50586 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TubP50586 Gm37292-201ENSMUST00000192062 758 ntBASIC18.15■□□□□ 0.5
TubP50586 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.15■□□□□ 0.5
TubP50586 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TubP50586 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TubP50586 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TubP50586 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TubP50586 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TubP50586 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
TubP50586 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TubP50586 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TubP50586 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TubP50586 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TubP50586 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms