Protein–RNA interactions for Protein: P50516

Atp6v1a, V-type proton ATPase catalytic subunit A, mousemouse

Known RBP Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1aP50516 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Atp6v1aP50516 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Atp6v1aP50516 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC21.33■■□□□ 1.01
Atp6v1aP50516 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC21.33■■□□□ 1.01
Atp6v1aP50516 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Atp6v1aP50516 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Atp6v1aP50516 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Atp6v1aP50516 Gm38308-201ENSMUST00000194934 1809 ntBASIC21.32■■□□□ 1
Atp6v1aP50516 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.32■■□□□ 1
Atp6v1aP50516 Gm45906-201ENSMUST00000208911 1430 ntBASIC21.32■■□□□ 1
Atp6v1aP50516 Gm13474-201ENSMUST00000122466 815 ntBASIC21.32■■□□□ 1
Atp6v1aP50516 Gm24841-201ENSMUST00000158676 357 ntBASIC21.32■■□□□ 1
Atp6v1aP50516 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Atp6v1aP50516 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.32■■□□□ 1
Atp6v1aP50516 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.32■■□□□ 1
Atp6v1aP50516 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC21.32■■□□□ 1
Atp6v1aP50516 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Atp6v1aP50516 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC21.31■■□□□ 1
Atp6v1aP50516 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21.31■■□□□ 1
Atp6v1aP50516 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Atp6v1aP50516 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Atp6v1aP50516 Gm21559-201ENSMUST00000220638 855 ntBASIC21.31■■□□□ 1
Atp6v1aP50516 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC21.31■■□□□ 1
Atp6v1aP50516 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC21.31■■□□□ 1
Atp6v1aP50516 Gm8587-201ENSMUST00000076538 843 ntBASIC21.31■■□□□ 1
Atp6v1aP50516 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Atp6v1aP50516 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC21.31■■□□□ 1
Atp6v1aP50516 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.31■■□□□ 1
Atp6v1aP50516 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Atp6v1aP50516 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Atp6v1aP50516 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC21.3■■□□□ 1
Atp6v1aP50516 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC21.3■■□□□ 1
Atp6v1aP50516 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Atp6v1aP50516 Gm5112-201ENSMUST00000204407 2368 ntBASIC21.3■■□□□ 1
Atp6v1aP50516 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Atp6v1aP50516 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC21.3■■□□□ 1
Atp6v1aP50516 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC21.3■■□□□ 1
Atp6v1aP50516 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Atp6v1aP50516 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC21.3■■□□□ 1
Atp6v1aP50516 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC21.3■■□□□ 1
Atp6v1aP50516 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC21.3■■□□□ 1
Atp6v1aP50516 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
Atp6v1aP50516 Gm7370-201ENSMUST00000219471 767 ntBASIC21.3■■□□□ 1
Atp6v1aP50516 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Atp6v1aP50516 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Atp6v1aP50516 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Atp6v1aP50516 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Atp6v1aP50516 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Atp6v1aP50516 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Atp6v1aP50516 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Atp6v1aP50516 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Atp6v1aP50516 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC21.29■■□□□ 1
Atp6v1aP50516 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC21.29■■□□□ 1
Atp6v1aP50516 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC21.29■■□□□ 1
Atp6v1aP50516 Gm27389-201ENSMUST00000183622 195 ntBASIC21.29■■□□□ 1
Atp6v1aP50516 Gm27704-201ENSMUST00000185094 107 ntBASIC21.29■■□□□ 1
Atp6v1aP50516 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC21.29■■□□□ 1
Atp6v1aP50516 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Atp6v1aP50516 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC21.29■■□□□ 1
Atp6v1aP50516 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Atp6v1aP50516 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Atp6v1aP50516 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Atp6v1aP50516 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC21.29■■□□□ 1
Atp6v1aP50516 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Atp6v1aP50516 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Atp6v1aP50516 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Atp6v1aP50516 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Atp6v1aP50516 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Atp6v1aP50516 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Atp6v1aP50516 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Atp6v1aP50516 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC21.28■■□□□ 1
Atp6v1aP50516 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC21.28■■□□□ 1
Atp6v1aP50516 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Atp6v1aP50516 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC21.28■■□□□ 1
Atp6v1aP50516 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC21.28■■□□□ 1
Atp6v1aP50516 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC21.28■■□□□ 1
Atp6v1aP50516 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Atp6v1aP50516 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC21.28■■□□□ 1
Atp6v1aP50516 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC21.28■■□□□ 1
Atp6v1aP50516 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Atp6v1aP50516 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Atp6v1aP50516 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Atp6v1aP50516 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC21.27■■□□□ 1
Atp6v1aP50516 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Atp6v1aP50516 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC21.27■■□□□ 1
Atp6v1aP50516 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.27■■□□□ 1
Atp6v1aP50516 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Atp6v1aP50516 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Atp6v1aP50516 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Atp6v1aP50516 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Atp6v1aP50516 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Atp6v1aP50516 Gm13401-201ENSMUST00000117074 291 ntBASIC21.27■■□□□ 1
Atp6v1aP50516 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC21.27■■□□□ 1
Atp6v1aP50516 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Atp6v1aP50516 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Atp6v1aP50516 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC21.27■■□□□ 1
Atp6v1aP50516 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Atp6v1aP50516 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC21.27■■□□□ 1
Atp6v1aP50516 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Atp6v1aP50516 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms