Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LtbrP50284 Mir6349-201ENSMUST00000184059 97 ntBASIC20.88■□□□□ 0.93
LtbrP50284 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
LtbrP50284 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
LtbrP50284 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LtbrP50284 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LtbrP50284 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LtbrP50284 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
LtbrP50284 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LtbrP50284 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LtbrP50284 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC20.87■□□□□ 0.93
LtbrP50284 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LtbrP50284 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
LtbrP50284 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.87■□□□□ 0.93
LtbrP50284 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LtbrP50284 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LtbrP50284 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LtbrP50284 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
LtbrP50284 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LtbrP50284 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LtbrP50284 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LtbrP50284 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LtbrP50284 Gm12085-201ENSMUST00000119263 940 ntBASIC20.86■□□□□ 0.93
LtbrP50284 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LtbrP50284 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LtbrP50284 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LtbrP50284 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.86■□□□□ 0.93
LtbrP50284 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LtbrP50284 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LtbrP50284 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LtbrP50284 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LtbrP50284 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LtbrP50284 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LtbrP50284 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LtbrP50284 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
LtbrP50284 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
LtbrP50284 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC20.85■□□□□ 0.93
LtbrP50284 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LtbrP50284 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC20.85■□□□□ 0.93
LtbrP50284 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
LtbrP50284 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LtbrP50284 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LtbrP50284 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.84■□□□□ 0.93
LtbrP50284 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LtbrP50284 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.84■□□□□ 0.93
LtbrP50284 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LtbrP50284 Umpk-ps-201ENSMUST00000211897 827 ntBASIC20.84■□□□□ 0.93
LtbrP50284 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.84■□□□□ 0.93
LtbrP50284 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LtbrP50284 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LtbrP50284 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LtbrP50284 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
LtbrP50284 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LtbrP50284 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LtbrP50284 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LtbrP50284 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC20.83■□□□□ 0.93
LtbrP50284 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
LtbrP50284 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
LtbrP50284 Gm17807-201ENSMUST00000186869 298 ntBASIC20.83■□□□□ 0.93
LtbrP50284 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
LtbrP50284 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LtbrP50284 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
LtbrP50284 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LtbrP50284 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LtbrP50284 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LtbrP50284 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LtbrP50284 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LtbrP50284 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LtbrP50284 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
LtbrP50284 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LtbrP50284 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LtbrP50284 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LtbrP50284 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LtbrP50284 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LtbrP50284 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LtbrP50284 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LtbrP50284 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC20.82■□□□□ 0.92
LtbrP50284 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LtbrP50284 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LtbrP50284 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LtbrP50284 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LtbrP50284 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.82■□□□□ 0.92
LtbrP50284 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LtbrP50284 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
LtbrP50284 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
LtbrP50284 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LtbrP50284 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LtbrP50284 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC20.81■□□□□ 0.92
LtbrP50284 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LtbrP50284 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
LtbrP50284 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.8■□□□□ 0.92
LtbrP50284 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LtbrP50284 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
LtbrP50284 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LtbrP50284 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.8■□□□□ 0.92
LtbrP50284 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LtbrP50284 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LtbrP50284 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LtbrP50284 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LtbrP50284 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms