Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ercc3P49135 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ercc3P49135 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
Ercc3P49135 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
Ercc3P49135 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ercc3P49135 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ercc3P49135 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ercc3P49135 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ercc3P49135 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ercc3P49135 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC21.01■□□□□ 0.95
Ercc3P49135 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
Ercc3P49135 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Ercc3P49135 Gm10812-201ENSMUST00000099864 546 ntBASIC21.01■□□□□ 0.95
Ercc3P49135 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ercc3P49135 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ercc3P49135 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Ercc3P49135 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ercc3P49135 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ercc3P49135 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ercc3P49135 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Ercc3P49135 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC21.01■□□□□ 0.95
Ercc3P49135 AC108858.1-201ENSMUST00000228461 1498 ntBASIC21.01■□□□□ 0.95
Ercc3P49135 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Ercc3P49135 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Ercc3P49135 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC21■□□□□ 0.95
Ercc3P49135 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC21■□□□□ 0.95
Ercc3P49135 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ercc3P49135 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC21■□□□□ 0.95
Ercc3P49135 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Ercc3P49135 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC21■□□□□ 0.95
Ercc3P49135 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC21■□□□□ 0.95
Ercc3P49135 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ercc3P49135 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Ercc3P49135 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Ercc3P49135 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ercc3P49135 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Ercc3P49135 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ercc3P49135 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ercc3P49135 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ercc3P49135 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ercc3P49135 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20.99■□□□□ 0.95
Ercc3P49135 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ercc3P49135 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.99■□□□□ 0.95
Ercc3P49135 Gm18025-201ENSMUST00000221733 862 ntBASIC20.99■□□□□ 0.95
Ercc3P49135 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ercc3P49135 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ercc3P49135 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ercc3P49135 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.99■□□□□ 0.95
Ercc3P49135 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ercc3P49135 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.98■□□□□ 0.95
Ercc3P49135 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Ercc3P49135 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ercc3P49135 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Ercc3P49135 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.98■□□□□ 0.95
Ercc3P49135 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ercc3P49135 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.98■□□□□ 0.95
Ercc3P49135 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ercc3P49135 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ercc3P49135 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.98■□□□□ 0.95
Ercc3P49135 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ercc3P49135 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ercc3P49135 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Ercc3P49135 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Ercc3P49135 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Ercc3P49135 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Ercc3P49135 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ercc3P49135 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.97■□□□□ 0.95
Ercc3P49135 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ercc3P49135 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Ercc3P49135 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.97■□□□□ 0.95
Ercc3P49135 Gm43183-201ENSMUST00000200632 547 ntBASIC20.97■□□□□ 0.95
Ercc3P49135 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.97■□□□□ 0.95
Ercc3P49135 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Ercc3P49135 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.97■□□□□ 0.95
Ercc3P49135 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Ercc3P49135 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ercc3P49135 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ercc3P49135 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ercc3P49135 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ercc3P49135 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ercc3P49135 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ercc3P49135 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ercc3P49135 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ercc3P49135 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ercc3P49135 Gm15378-201ENSMUST00000121894 207 ntBASIC20.96■□□□□ 0.95
Ercc3P49135 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.96■□□□□ 0.95
Ercc3P49135 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.96■□□□□ 0.95
Ercc3P49135 Gm37292-201ENSMUST00000192062 758 ntBASIC20.96■□□□□ 0.95
Ercc3P49135 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.96■□□□□ 0.95
Ercc3P49135 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ercc3P49135 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ercc3P49135 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ercc3P49135 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ercc3P49135 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Ercc3P49135 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Ercc3P49135 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Ercc3P49135 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ercc3P49135 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ercc3P49135 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ercc3P49135 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms