Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Brca1P48754 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Brca1P48754 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Brca1P48754 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Brca1P48754 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Brca1P48754 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Brca1P48754 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.04■□□□□ 0.8
Brca1P48754 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Brca1P48754 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Brca1P48754 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Brca1P48754 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Brca1P48754 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC20.04■□□□□ 0.8
Brca1P48754 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC20.04■□□□□ 0.8
Brca1P48754 Mir3081-201ENSMUST00000175305 84 ntBASIC20.04■□□□□ 0.8
Brca1P48754 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Brca1P48754 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Brca1P48754 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Brca1P48754 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Brca1P48754 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Brca1P48754 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Brca1P48754 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Brca1P48754 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Brca1P48754 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Brca1P48754 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC20.03■□□□□ 0.8
Brca1P48754 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC20.03■□□□□ 0.8
Brca1P48754 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Brca1P48754 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Brca1P48754 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
Brca1P48754 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Brca1P48754 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Brca1P48754 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Brca1P48754 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC20.02■□□□□ 0.8
Brca1P48754 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Brca1P48754 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Brca1P48754 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Brca1P48754 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Brca1P48754 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Brca1P48754 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Brca1P48754 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Brca1P48754 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Brca1P48754 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Brca1P48754 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Brca1P48754 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.02■□□□□ 0.79
Brca1P48754 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Brca1P48754 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC20.02■□□□□ 0.79
Brca1P48754 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Brca1P48754 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Brca1P48754 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Brca1P48754 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Brca1P48754 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Brca1P48754 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
Brca1P48754 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Brca1P48754 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC20.01■□□□□ 0.79
Brca1P48754 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Brca1P48754 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Brca1P48754 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Brca1P48754 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Brca1P48754 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Brca1P48754 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Brca1P48754 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
Brca1P48754 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Brca1P48754 Gm11355-201ENSMUST00000121120 306 ntBASIC20■□□□□ 0.79
Brca1P48754 Gm6443-201ENSMUST00000203599 874 ntBASIC20■□□□□ 0.79
Brca1P48754 Gm7213-201ENSMUST00000215977 950 ntBASIC20■□□□□ 0.79
Brca1P48754 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Brca1P48754 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Brca1P48754 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20■□□□□ 0.79
Brca1P48754 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.99■□□□□ 0.79
Brca1P48754 Gm10566-201ENSMUST00000086739 996 ntBASIC19.99■□□□□ 0.79
Brca1P48754 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Brca1P48754 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.99■□□□□ 0.79
Brca1P48754 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Brca1P48754 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Brca1P48754 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Brca1P48754 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Brca1P48754 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Brca1P48754 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.99■□□□□ 0.79
Brca1P48754 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Brca1P48754 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC19.99■□□□□ 0.79
Brca1P48754 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC19.99■□□□□ 0.79
Brca1P48754 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Brca1P48754 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Brca1P48754 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Brca1P48754 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Brca1P48754 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Brca1P48754 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Brca1P48754 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Brca1P48754 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Brca1P48754 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Brca1P48754 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Brca1P48754 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.98■□□□□ 0.79
Brca1P48754 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Brca1P48754 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Brca1P48754 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC19.98■□□□□ 0.79
Brca1P48754 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Brca1P48754 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Brca1P48754 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Brca1P48754 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Brca1P48754 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Brca1P48754 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms