Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.8■□□□□ 0.28
Nkx2-6P43688 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-6P43688 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-6P43688 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-6P43688 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-6P43688 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-6P43688 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-6P43688 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-6P43688 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.79■□□□□ 0.28
Nkx2-6P43688 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.79■□□□□ 0.28
Nkx2-6P43688 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-6P43688 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-6P43688 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-6P43688 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Nkx2-6P43688 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-6P43688 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-6P43688 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-6P43688 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.79■□□□□ 0.28
Nkx2-6P43688 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.79■□□□□ 0.28
Nkx2-6P43688 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-6P43688 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-6P43688 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-6P43688 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-6P43688 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-6P43688 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-6P43688 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-6P43688 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-6P43688 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.78■□□□□ 0.28
Nkx2-6P43688 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-6P43688 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-6P43688 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Nkx2-6P43688 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.78■□□□□ 0.28
Nkx2-6P43688 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Nkx2-6P43688 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.78■□□□□ 0.28
Nkx2-6P43688 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-6P43688 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Nkx2-6P43688 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-6P43688 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-6P43688 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.78■□□□□ 0.28
Nkx2-6P43688 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-6P43688 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-6P43688 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-6P43688 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.78■□□□□ 0.28
Nkx2-6P43688 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-6P43688 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
Nkx2-6P43688 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Nkx2-6P43688 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Nkx2-6P43688 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nkx2-6P43688 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nkx2-6P43688 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.77■□□□□ 0.28
Nkx2-6P43688 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Nkx2-6P43688 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.77■□□□□ 0.28
Nkx2-6P43688 Gm11539-201ENSMUST00000119837 557 ntBASIC16.77■□□□□ 0.28
Nkx2-6P43688 Gm13436-201ENSMUST00000120418 567 ntBASIC16.77■□□□□ 0.28
Nkx2-6P43688 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.77■□□□□ 0.28
Nkx2-6P43688 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Nkx2-6P43688 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nkx2-6P43688 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nkx2-6P43688 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nkx2-6P43688 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Nkx2-6P43688 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nkx2-6P43688 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Nkx2-6P43688 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.76■□□□□ 0.27
Nkx2-6P43688 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx2-6P43688 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx2-6P43688 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.76■□□□□ 0.27
Nkx2-6P43688 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.76■□□□□ 0.27
Nkx2-6P43688 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.76■□□□□ 0.27
Nkx2-6P43688 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.76■□□□□ 0.27
Nkx2-6P43688 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx2-6P43688 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx2-6P43688 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx2-6P43688 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx2-6P43688 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.76■□□□□ 0.27
Nkx2-6P43688 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx2-6P43688 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Nkx2-6P43688 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx2-6P43688 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx2-6P43688 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx2-6P43688 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx2-6P43688 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx2-6P43688 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx2-6P43688 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx2-6P43688 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx2-6P43688 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx2-6P43688 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Nkx2-6P43688 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx2-6P43688 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Nkx2-6P43688 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.75■□□□□ 0.27
Nkx2-6P43688 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx2-6P43688 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx2-6P43688 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx2-6P43688 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx2-6P43688 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.75■□□□□ 0.27
Nkx2-6P43688 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Nkx2-6P43688 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx2-6P43688 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Nkx2-6P43688 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx2-6P43688 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.74■□□□□ 0.27
Nkx2-6P43688 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms