Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdx2P43241 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cdx2P43241 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdx2P43241 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Cdx2P43241 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdx2P43241 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdx2P43241 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdx2P43241 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdx2P43241 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Cdx2P43241 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdx2P43241 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Cdx2P43241 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cdx2P43241 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdx2P43241 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdx2P43241 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdx2P43241 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cdx2P43241 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdx2P43241 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cdx2P43241 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdx2P43241 Gm10418-201ENSMUST00000100943 576 ntBASIC16.87■□□□□ 0.29
Cdx2P43241 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdx2P43241 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.87■□□□□ 0.29
Cdx2P43241 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cdx2P43241 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.87■□□□□ 0.29
Cdx2P43241 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.87■□□□□ 0.29
Cdx2P43241 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.87■□□□□ 0.29
Cdx2P43241 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.87■□□□□ 0.29
Cdx2P43241 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdx2P43241 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.87■□□□□ 0.29
Cdx2P43241 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.87■□□□□ 0.29
Cdx2P43241 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdx2P43241 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdx2P43241 BC021767-201ENSMUST00000126387 1716 ntBASIC16.87■□□□□ 0.29
Cdx2P43241 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Cdx2P43241 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdx2P43241 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.86■□□□□ 0.29
Cdx2P43241 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.86■□□□□ 0.29
Cdx2P43241 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdx2P43241 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.86■□□□□ 0.29
Cdx2P43241 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.86■□□□□ 0.29
Cdx2P43241 Gm27704-201ENSMUST00000185094 107 ntBASIC16.86■□□□□ 0.29
Cdx2P43241 Gm5587-201ENSMUST00000206270 674 ntBASIC16.86■□□□□ 0.29
Cdx2P43241 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cdx2P43241 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cdx2P43241 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cdx2P43241 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Cdx2P43241 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Cdx2P43241 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdx2P43241 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdx2P43241 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdx2P43241 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdx2P43241 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdx2P43241 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdx2P43241 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Cdx2P43241 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdx2P43241 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.85■□□□□ 0.29
Cdx2P43241 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
Cdx2P43241 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cdx2P43241 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.85■□□□□ 0.29
Cdx2P43241 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdx2P43241 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdx2P43241 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdx2P43241 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdx2P43241 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdx2P43241 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cdx2P43241 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.85■□□□□ 0.29
Cdx2P43241 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.85■□□□□ 0.29
Cdx2P43241 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
Cdx2P43241 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdx2P43241 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Cdx2P43241 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.85■□□□□ 0.29
Cdx2P43241 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.85■□□□□ 0.29
Cdx2P43241 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.85■□□□□ 0.29
Cdx2P43241 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdx2P43241 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdx2P43241 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdx2P43241 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdx2P43241 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdx2P43241 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdx2P43241 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdx2P43241 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Cdx2P43241 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.84■□□□□ 0.29
Cdx2P43241 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdx2P43241 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Cdx2P43241 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Cdx2P43241 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.84■□□□□ 0.29
Cdx2P43241 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdx2P43241 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cdx2P43241 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cdx2P43241 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdx2P43241 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdx2P43241 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cdx2P43241 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Cdx2P43241 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.83■□□□□ 0.29
Cdx2P43241 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.83■□□□□ 0.29
Cdx2P43241 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cdx2P43241 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Cdx2P43241 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdx2P43241 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdx2P43241 Mir1668-201ENSMUST00000184114 107 ntBASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms