Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-2P42586 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-2P42586 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-2P42586 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-2P42586 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-2P42586 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.3■□□□□ 0.2
Nkx2-2P42586 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-2P42586 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-2P42586 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-2P42586 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-2P42586 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-2P42586 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.29■□□□□ 0.2
Nkx2-2P42586 Gm18666-201ENSMUST00000190039 958 ntBASIC16.29■□□□□ 0.2
Nkx2-2P42586 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-2P42586 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Nkx2-2P42586 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.29■□□□□ 0.2
Nkx2-2P42586 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-2P42586 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-2P42586 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Nkx2-2P42586 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-2P42586 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.29■□□□□ 0.2
Nkx2-2P42586 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.29■□□□□ 0.2
Nkx2-2P42586 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-2P42586 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-2P42586 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-2P42586 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-2P42586 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-2P42586 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Nkx2-2P42586 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-2P42586 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.28■□□□□ 0.2
Nkx2-2P42586 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Nkx2-2P42586 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-2P42586 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-2P42586 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-2P42586 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Nkx2-2P42586 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.28■□□□□ 0.2
Nkx2-2P42586 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-2P42586 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-2P42586 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-2P42586 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.28■□□□□ 0.2
Nkx2-2P42586 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-2P42586 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-2P42586 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-2P42586 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.28■□□□□ 0.2
Nkx2-2P42586 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-2P42586 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx2-2P42586 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx2-2P42586 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx2-2P42586 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx2-2P42586 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx2-2P42586 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx2-2P42586 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Nkx2-2P42586 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.27■□□□□ 0.2
Nkx2-2P42586 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
Nkx2-2P42586 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.27■□□□□ 0.19
Nkx2-2P42586 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.27■□□□□ 0.19
Nkx2-2P42586 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nkx2-2P42586 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nkx2-2P42586 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Nkx2-2P42586 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.19
Nkx2-2P42586 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Nkx2-2P42586 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
Nkx2-2P42586 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx2-2P42586 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx2-2P42586 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Nkx2-2P42586 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.26■□□□□ 0.19
Nkx2-2P42586 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx2-2P42586 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.26■□□□□ 0.19
Nkx2-2P42586 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx2-2P42586 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx2-2P42586 Gm13401-201ENSMUST00000117074 291 ntBASIC16.26■□□□□ 0.19
Nkx2-2P42586 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx2-2P42586 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.26■□□□□ 0.19
Nkx2-2P42586 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.26■□□□□ 0.19
Nkx2-2P42586 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.26■□□□□ 0.19
Nkx2-2P42586 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Nkx2-2P42586 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx2-2P42586 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx2-2P42586 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx2-2P42586 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx2-2P42586 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx2-2P42586 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx2-2P42586 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.26■□□□□ 0.19
Nkx2-2P42586 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx2-2P42586 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx2-2P42586 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx2-2P42586 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx2-2P42586 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Nkx2-2P42586 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx2-2P42586 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Nkx2-2P42586 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx2-2P42586 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx2-2P42586 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx2-2P42586 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.25■□□□□ 0.19
Nkx2-2P42586 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx2-2P42586 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx2-2P42586 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Nkx2-2P42586 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.25■□□□□ 0.19
Nkx2-2P42586 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.25■□□□□ 0.19
Nkx2-2P42586 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms