Protein–RNA interactions for Protein: P35460

Ly6f, Lymphocyte antigen 6F, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6fP35460 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ly6fP35460 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ly6fP35460 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.09■□□□□ 0.33
Ly6fP35460 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ly6fP35460 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ly6fP35460 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ly6fP35460 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ly6fP35460 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ly6fP35460 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ly6fP35460 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Ly6fP35460 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ly6fP35460 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ly6fP35460 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.08■□□□□ 0.32
Ly6fP35460 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ly6fP35460 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ly6fP35460 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.08■□□□□ 0.32
Ly6fP35460 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ly6fP35460 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Ly6fP35460 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ly6fP35460 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.08■□□□□ 0.32
Ly6fP35460 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ly6fP35460 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ly6fP35460 Golph3-205ENSMUST00000228671 2842 ntBASIC17.08■□□□□ 0.32
Ly6fP35460 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ly6fP35460 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ly6fP35460 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ly6fP35460 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ly6fP35460 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ly6fP35460 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ly6fP35460 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ly6fP35460 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ly6fP35460 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ly6fP35460 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ly6fP35460 Gm7638-201ENSMUST00000121348 967 ntBASIC17.07■□□□□ 0.32
Ly6fP35460 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.07■□□□□ 0.32
Ly6fP35460 Gm7791-201ENSMUST00000219066 539 ntBASIC17.07■□□□□ 0.32
Ly6fP35460 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ly6fP35460 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ly6fP35460 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ly6fP35460 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ly6fP35460 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ly6fP35460 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ly6fP35460 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ly6fP35460 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ly6fP35460 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ly6fP35460 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ly6fP35460 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ly6fP35460 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.06■□□□□ 0.32
Ly6fP35460 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.06■□□□□ 0.32
Ly6fP35460 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.06■□□□□ 0.32
Ly6fP35460 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ly6fP35460 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ly6fP35460 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ly6fP35460 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ly6fP35460 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ly6fP35460 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ly6fP35460 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ly6fP35460 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ly6fP35460 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ly6fP35460 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ly6fP35460 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ly6fP35460 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ly6fP35460 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ly6fP35460 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Ly6fP35460 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ly6fP35460 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ly6fP35460 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Ly6fP35460 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ly6fP35460 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ly6fP35460 AA414768-201ENSMUST00000121924 1257 ntBASIC17.05■□□□□ 0.32
Ly6fP35460 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.05■□□□□ 0.32
Ly6fP35460 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ly6fP35460 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ly6fP35460 Gm6345-202ENSMUST00000180900 204 ntBASIC17.05■□□□□ 0.32
Ly6fP35460 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ly6fP35460 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.05■□□□□ 0.32
Ly6fP35460 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ly6fP35460 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ly6fP35460 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Ly6fP35460 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ly6fP35460 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ly6fP35460 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.05■□□□□ 0.32
Ly6fP35460 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Ly6fP35460 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ly6fP35460 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ly6fP35460 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Ly6fP35460 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ly6fP35460 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ly6fP35460 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ly6fP35460 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Ly6fP35460 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ly6fP35460 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ly6fP35460 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ly6fP35460 Gm22697-201ENSMUST00000175194 63 ntBASIC17.04■□□□□ 0.32
Ly6fP35460 Gm18101-201ENSMUST00000215769 548 ntBASIC17.04■□□□□ 0.32
Ly6fP35460 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.04■□□□□ 0.32
Ly6fP35460 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ly6fP35460 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ly6fP35460 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ly6fP35460 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms