Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Gm30025-201ENSMUST00000218555 728 ntBASIC18.25■□□□□ 0.51
Nfkb1P25799 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nfkb1P25799 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Nfkb1P25799 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nfkb1P25799 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nfkb1P25799 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nfkb1P25799 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Nfkb1P25799 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nfkb1P25799 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nfkb1P25799 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.24■□□□□ 0.51
Nfkb1P25799 Odf3b-204ENSMUST00000227834 930 ntBASIC18.24■□□□□ 0.51
Nfkb1P25799 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nfkb1P25799 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nfkb1P25799 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nfkb1P25799 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nfkb1P25799 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nfkb1P25799 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nfkb1P25799 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nfkb1P25799 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nfkb1P25799 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Nfkb1P25799 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nfkb1P25799 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nfkb1P25799 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Nfkb1P25799 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Nfkb1P25799 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Nfkb1P25799 Gm3375-201ENSMUST00000203929 796 ntBASIC18.23■□□□□ 0.51
Nfkb1P25799 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Nfkb1P25799 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nfkb1P25799 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Nfkb1P25799 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Nfkb1P25799 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Nfkb1P25799 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nfkb1P25799 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Nfkb1P25799 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
Nfkb1P25799 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.22■□□□□ 0.51
Nfkb1P25799 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Nfkb1P25799 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nfkb1P25799 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Nfkb1P25799 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nfkb1P25799 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nfkb1P25799 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nfkb1P25799 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nfkb1P25799 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nfkb1P25799 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nfkb1P25799 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nfkb1P25799 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nfkb1P25799 Gm11643-201ENSMUST00000119578 864 ntBASIC18.21■□□□□ 0.51
Nfkb1P25799 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nfkb1P25799 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nfkb1P25799 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nfkb1P25799 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nfkb1P25799 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nfkb1P25799 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nfkb1P25799 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nfkb1P25799 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nfkb1P25799 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nfkb1P25799 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nfkb1P25799 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nfkb1P25799 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Nfkb1P25799 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nfkb1P25799 Gm6433-201ENSMUST00000118634 875 ntBASIC18.2■□□□□ 0.5
Nfkb1P25799 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nfkb1P25799 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nfkb1P25799 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nfkb1P25799 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Nfkb1P25799 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nfkb1P25799 Tgds-204ENSMUST00000228543 1594 ntBASIC18.2■□□□□ 0.5
Nfkb1P25799 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nfkb1P25799 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nfkb1P25799 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nfkb1P25799 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Nfkb1P25799 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Nfkb1P25799 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Nfkb1P25799 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nfkb1P25799 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nfkb1P25799 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nfkb1P25799 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nfkb1P25799 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.19■□□□□ 0.5
Nfkb1P25799 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Nfkb1P25799 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nfkb1P25799 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Nfkb1P25799 Gm10517-202ENSMUST00000192970 758 ntBASIC18.19■□□□□ 0.5
Nfkb1P25799 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nfkb1P25799 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.19■□□□□ 0.5
Nfkb1P25799 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nfkb1P25799 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nfkb1P25799 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nfkb1P25799 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nfkb1P25799 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nfkb1P25799 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nfkb1P25799 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.19■□□□□ 0.5
Nfkb1P25799 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nfkb1P25799 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nfkb1P25799 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Nfkb1P25799 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nfkb1P25799 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nfkb1P25799 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nfkb1P25799 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nfkb1P25799 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.18■□□□□ 0.5
Nfkb1P25799 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms