Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cbx3P23198 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Cbx3P23198 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.17■□□□□ 0.18
Cbx3P23198 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cbx3P23198 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Cbx3P23198 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.17■□□□□ 0.18
Cbx3P23198 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cbx3P23198 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cbx3P23198 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Cbx3P23198 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cbx3P23198 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cbx3P23198 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cbx3P23198 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cbx3P23198 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cbx3P23198 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cbx3P23198 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cbx3P23198 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Cbx3P23198 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cbx3P23198 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cbx3P23198 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Cbx3P23198 AA386476-201ENSMUST00000098781 1665 ntBASIC16.16■□□□□ 0.18
Cbx3P23198 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cbx3P23198 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.16■□□□□ 0.18
Cbx3P23198 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.16■□□□□ 0.18
Cbx3P23198 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Cbx3P23198 Gm9959-201ENSMUST00000068277 390 ntBASIC16.16■□□□□ 0.18
Cbx3P23198 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Cbx3P23198 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cbx3P23198 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cbx3P23198 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cbx3P23198 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Cbx3P23198 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cbx3P23198 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cbx3P23198 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cbx3P23198 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Cbx3P23198 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cbx3P23198 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Cbx3P23198 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cbx3P23198 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cbx3P23198 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cbx3P23198 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC16.15■□□□□ 0.18
Cbx3P23198 Gm22238-201ENSMUST00000175222 88 ntBASIC16.15■□□□□ 0.18
Cbx3P23198 Gm8969-201ENSMUST00000199694 526 ntBASIC16.15■□□□□ 0.18
Cbx3P23198 Rps24-207ENSMUST00000224568 714 ntBASIC16.15■□□□□ 0.18
Cbx3P23198 AC093043.1-201ENSMUST00000226700 898 ntBASIC16.15■□□□□ 0.18
Cbx3P23198 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cbx3P23198 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cbx3P23198 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Cbx3P23198 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Cbx3P23198 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.15■□□□□ 0.18
Cbx3P23198 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cbx3P23198 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cbx3P23198 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cbx3P23198 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Cbx3P23198 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cbx3P23198 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
Cbx3P23198 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cbx3P23198 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cbx3P23198 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cbx3P23198 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.14■□□□□ 0.17
Cbx3P23198 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cbx3P23198 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Cbx3P23198 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Cbx3P23198 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cbx3P23198 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cbx3P23198 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cbx3P23198 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cbx3P23198 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Cbx3P23198 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cbx3P23198 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cbx3P23198 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cbx3P23198 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cbx3P23198 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Cbx3P23198 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cbx3P23198 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Cbx3P23198 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Cbx3P23198 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cbx3P23198 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cbx3P23198 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cbx3P23198 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.13■□□□□ 0.17
Cbx3P23198 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cbx3P23198 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cbx3P23198 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cbx3P23198 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.13■□□□□ 0.17
Cbx3P23198 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.13■□□□□ 0.17
Cbx3P23198 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cbx3P23198 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cbx3P23198 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cbx3P23198 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cbx3P23198 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cbx3P23198 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cbx3P23198 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cbx3P23198 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cbx3P23198 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Cbx3P23198 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cbx3P23198 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cbx3P23198 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cbx3P23198 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cbx3P23198 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cbx3P23198 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms