Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ly6c1P0CW02 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ly6c1P0CW02 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ly6c1P0CW02 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ly6c1P0CW02 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ly6c1P0CW02 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ly6c1P0CW02 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ly6c1P0CW02 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ly6c1P0CW02 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ly6c1P0CW02 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.81□□□□□ -0.04
Ly6c1P0CW02 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ly6c1P0CW02 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ly6c1P0CW02 Gm12382-201ENSMUST00000122005 922 ntBASIC14.81□□□□□ -0.04
Ly6c1P0CW02 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC14.81□□□□□ -0.04
Ly6c1P0CW02 Gm10252-201ENSMUST00000209541 832 ntBASIC14.81□□□□□ -0.04
Ly6c1P0CW02 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ly6c1P0CW02 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ly6c1P0CW02 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Ly6c1P0CW02 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ly6c1P0CW02 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ly6c1P0CW02 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ly6c1P0CW02 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ly6c1P0CW02 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ly6c1P0CW02 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ly6c1P0CW02 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ly6c1P0CW02 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ly6c1P0CW02 Gm45141-201ENSMUST00000206502 1888 ntBASIC14.8□□□□□ -0.04
Ly6c1P0CW02 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ly6c1P0CW02 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Ly6c1P0CW02 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ly6c1P0CW02 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ly6c1P0CW02 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ly6c1P0CW02 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Ly6c1P0CW02 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ly6c1P0CW02 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.8□□□□□ -0.04
Ly6c1P0CW02 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ly6c1P0CW02 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Ly6c1P0CW02 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ly6c1P0CW02 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ly6c1P0CW02 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ly6c1P0CW02 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Ly6c1P0CW02 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ly6c1P0CW02 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC14.8□□□□□ -0.04
Ly6c1P0CW02 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ly6c1P0CW02 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.8□□□□□ -0.04
Ly6c1P0CW02 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Ly6c1P0CW02 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ly6c1P0CW02 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ly6c1P0CW02 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ly6c1P0CW02 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.79□□□□□ -0.04
Ly6c1P0CW02 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ly6c1P0CW02 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ly6c1P0CW02 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ly6c1P0CW02 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
Ly6c1P0CW02 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.79□□□□□ -0.04
Ly6c1P0CW02 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ly6c1P0CW02 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ly6c1P0CW02 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ly6c1P0CW02 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ly6c1P0CW02 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ly6c1P0CW02 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ly6c1P0CW02 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ly6c1P0CW02 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ly6c1P0CW02 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ly6c1P0CW02 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Ly6c1P0CW02 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ly6c1P0CW02 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ly6c1P0CW02 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ly6c1P0CW02 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ly6c1P0CW02 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ly6c1P0CW02 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ly6c1P0CW02 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ly6c1P0CW02 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ly6c1P0CW02 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ly6c1P0CW02 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.78□□□□□ -0.04
Ly6c1P0CW02 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ly6c1P0CW02 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ly6c1P0CW02 Gm13401-201ENSMUST00000117074 291 ntBASIC14.78□□□□□ -0.04
Ly6c1P0CW02 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ly6c1P0CW02 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.78□□□□□ -0.04
Ly6c1P0CW02 Gm6576-201ENSMUST00000169678 883 ntBASIC14.78□□□□□ -0.04
Ly6c1P0CW02 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.78□□□□□ -0.04
Ly6c1P0CW02 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ly6c1P0CW02 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ly6c1P0CW02 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ly6c1P0CW02 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ly6c1P0CW02 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ly6c1P0CW02 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ly6c1P0CW02 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ly6c1P0CW02 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.78□□□□□ -0.04
Ly6c1P0CW02 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ly6c1P0CW02 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ly6c1P0CW02 Idnk-204ENSMUST00000226010 1898 ntBASIC14.78□□□□□ -0.04
Ly6c1P0CW02 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC14.78□□□□□ -0.04
Ly6c1P0CW02 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ly6c1P0CW02 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ly6c1P0CW02 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Ly6c1P0CW02 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ly6c1P0CW02 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ly6c1P0CW02 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms