Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Polr2aP08775 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Polr2aP08775 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Polr2aP08775 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Polr2aP08775 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Polr2aP08775 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Polr2aP08775 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Polr2aP08775 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Polr2aP08775 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
Polr2aP08775 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC20.33■□□□□ 0.84
Polr2aP08775 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Polr2aP08775 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Polr2aP08775 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Polr2aP08775 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Polr2aP08775 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Polr2aP08775 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Polr2aP08775 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Polr2aP08775 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Polr2aP08775 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Polr2aP08775 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Polr2aP08775 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Polr2aP08775 Gm27742-201ENSMUST00000184667 60 ntBASIC20.32■□□□□ 0.84
Polr2aP08775 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Polr2aP08775 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Polr2aP08775 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Polr2aP08775 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Polr2aP08775 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Polr2aP08775 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Polr2aP08775 Cxcl14-202ENSMUST00000224801 1467 ntBASIC20.32■□□□□ 0.84
Polr2aP08775 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Polr2aP08775 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
Polr2aP08775 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Polr2aP08775 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Polr2aP08775 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Polr2aP08775 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC20.32■□□□□ 0.84
Polr2aP08775 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.31■□□□□ 0.84
Polr2aP08775 Tgds-204ENSMUST00000228543 1594 ntBASIC20.31■□□□□ 0.84
Polr2aP08775 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Polr2aP08775 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Polr2aP08775 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Polr2aP08775 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Polr2aP08775 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Polr2aP08775 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC20.31■□□□□ 0.84
Polr2aP08775 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Polr2aP08775 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Polr2aP08775 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Polr2aP08775 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
Polr2aP08775 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Polr2aP08775 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Polr2aP08775 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Polr2aP08775 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
Polr2aP08775 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC20.3■□□□□ 0.84
Polr2aP08775 Gm43514-201ENSMUST00000198852 424 ntBASIC20.3■□□□□ 0.84
Polr2aP08775 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Polr2aP08775 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Polr2aP08775 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Polr2aP08775 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Polr2aP08775 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Polr2aP08775 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Polr2aP08775 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Polr2aP08775 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Polr2aP08775 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Polr2aP08775 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Polr2aP08775 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Polr2aP08775 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Polr2aP08775 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Polr2aP08775 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC20.3■□□□□ 0.84
Polr2aP08775 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.3■□□□□ 0.84
Polr2aP08775 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Polr2aP08775 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Polr2aP08775 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Polr2aP08775 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Polr2aP08775 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Polr2aP08775 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Polr2aP08775 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.29■□□□□ 0.84
Polr2aP08775 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Polr2aP08775 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Polr2aP08775 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC20.29■□□□□ 0.84
Polr2aP08775 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Polr2aP08775 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Polr2aP08775 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Polr2aP08775 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Polr2aP08775 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Polr2aP08775 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Polr2aP08775 Gm28659-201ENSMUST00000188013 759 ntBASIC20.28■□□□□ 0.84
Polr2aP08775 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Polr2aP08775 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Polr2aP08775 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Polr2aP08775 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20.28■□□□□ 0.84
Polr2aP08775 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Polr2aP08775 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC20.28■□□□□ 0.84
Polr2aP08775 Gm18733-201ENSMUST00000173950 856 ntBASIC20.28■□□□□ 0.84
Polr2aP08775 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC20.28■□□□□ 0.84
Polr2aP08775 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Polr2aP08775 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Polr2aP08775 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Polr2aP08775 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Polr2aP08775 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Polr2aP08775 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Polr2aP08775 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms