Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.84■□□□□ 0.29
ApoeP08226 Gm6139-201ENSMUST00000079261 882 ntBASIC16.84■□□□□ 0.29
ApoeP08226 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
ApoeP08226 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
ApoeP08226 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ApoeP08226 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.84■□□□□ 0.29
ApoeP08226 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ApoeP08226 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ApoeP08226 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ApoeP08226 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ApoeP08226 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
ApoeP08226 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
ApoeP08226 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
ApoeP08226 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ApoeP08226 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
ApoeP08226 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ApoeP08226 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.83■□□□□ 0.28
ApoeP08226 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ApoeP08226 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.83■□□□□ 0.28
ApoeP08226 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ApoeP08226 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ApoeP08226 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ApoeP08226 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
ApoeP08226 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ApoeP08226 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
ApoeP08226 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ApoeP08226 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ApoeP08226 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ApoeP08226 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ApoeP08226 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ApoeP08226 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC16.82■□□□□ 0.28
ApoeP08226 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ApoeP08226 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
ApoeP08226 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ApoeP08226 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ApoeP08226 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ApoeP08226 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ApoeP08226 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ApoeP08226 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ApoeP08226 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ApoeP08226 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ApoeP08226 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ApoeP08226 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ApoeP08226 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
ApoeP08226 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ApoeP08226 Gm43034-201ENSMUST00000198678 1364 ntBASIC16.81■□□□□ 0.28
ApoeP08226 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ApoeP08226 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ApoeP08226 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.81■□□□□ 0.28
ApoeP08226 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
ApoeP08226 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ApoeP08226 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
ApoeP08226 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ApoeP08226 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ApoeP08226 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ApoeP08226 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
ApoeP08226 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
ApoeP08226 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ApoeP08226 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ApoeP08226 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
ApoeP08226 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ApoeP08226 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ApoeP08226 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ApoeP08226 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ApoeP08226 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.8■□□□□ 0.28
ApoeP08226 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ApoeP08226 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
ApoeP08226 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ApoeP08226 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.8■□□□□ 0.28
ApoeP08226 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ApoeP08226 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ApoeP08226 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
ApoeP08226 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ApoeP08226 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ApoeP08226 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.8■□□□□ 0.28
ApoeP08226 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ApoeP08226 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ApoeP08226 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.8■□□□□ 0.28
ApoeP08226 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
ApoeP08226 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ApoeP08226 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ApoeP08226 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ApoeP08226 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ApoeP08226 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ApoeP08226 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
ApoeP08226 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.79■□□□□ 0.28
ApoeP08226 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ApoeP08226 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ApoeP08226 Gm12821-201ENSMUST00000120022 600 ntBASIC16.79■□□□□ 0.28
ApoeP08226 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ApoeP08226 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ApoeP08226 Cdc34b-202ENSMUST00000188741 1252 ntBASIC16.79■□□□□ 0.28
ApoeP08226 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ApoeP08226 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
ApoeP08226 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC16.79■□□□□ 0.28
ApoeP08226 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ApoeP08226 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ApoeP08226 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ApoeP08226 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.79■□□□□ 0.28
ApoeP08226 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms