Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
P04213 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
P04213 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
P04213 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
P04213 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
P04213 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
P04213 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.04■□□□□ 0.32
P04213 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.04■□□□□ 0.32
P04213 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
P04213 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
P04213 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
P04213 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
P04213 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
P04213 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
P04213 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
P04213 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
P04213 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.03■□□□□ 0.32
P04213 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.03■□□□□ 0.32
P04213 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04213 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04213 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04213 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04213 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
P04213 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.03■□□□□ 0.32
P04213 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04213 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04213 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04213 Gm8969-201ENSMUST00000199694 526 ntBASIC17.03■□□□□ 0.32
P04213 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.03■□□□□ 0.32
P04213 Mtag2-201ENSMUST00000058665 714 ntBASIC17.03■□□□□ 0.32
P04213 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04213 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04213 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
P04213 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
P04213 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04213 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04213 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04213 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04213 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
P04213 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
P04213 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.02■□□□□ 0.32
P04213 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
P04213 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
P04213 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
P04213 Gm11927-201ENSMUST00000118472 759 ntBASIC17.02■□□□□ 0.32
P04213 Gm12933-201ENSMUST00000120203 872 ntBASIC17.02■□□□□ 0.32
P04213 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.02■□□□□ 0.32
P04213 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.02■□□□□ 0.32
P04213 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.02■□□□□ 0.32
P04213 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
P04213 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
P04213 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
P04213 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.02■□□□□ 0.32
P04213 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
P04213 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
P04213 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
P04213 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
P04213 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
P04213 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
P04213 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
P04213 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.02■□□□□ 0.31
P04213 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.02■□□□□ 0.31
P04213 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.02■□□□□ 0.31
P04213 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
P04213 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
P04213 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P04213 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P04213 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.01■□□□□ 0.31
P04213 Flg-201ENSMUST00000050758 1488 ntBASIC17.01■□□□□ 0.31
P04213 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.01■□□□□ 0.31
P04213 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
P04213 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P04213 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
P04213 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
P04213 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
P04213 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
P04213 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P04213 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P04213 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P04213 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
P04213 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
P04213 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P04213 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
P04213 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P04213 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.01■□□□□ 0.31
P04213 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
P04213 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
P04213 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17■□□□□ 0.31
P04213 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
P04213 Gm5898-201ENSMUST00000121016 2071 ntBASIC17■□□□□ 0.31
P04213 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
P04213 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17■□□□□ 0.31
P04213 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
P04213 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
P04213 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17■□□□□ 0.31
P04213 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
P04213 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17■□□□□ 0.31
P04213 Gm5408-201ENSMUST00000197998 747 ntBASIC17■□□□□ 0.31
P04213 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17■□□□□ 0.31
P04213 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms