Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H3f3cP02301 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H3f3cP02301 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
H3f3cP02301 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H3f3cP02301 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
H3f3cP02301 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H3f3cP02301 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.24■□□□□ 0.03
H3f3cP02301 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H3f3cP02301 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H3f3cP02301 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
H3f3cP02301 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H3f3cP02301 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H3f3cP02301 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H3f3cP02301 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H3f3cP02301 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC15.24■□□□□ 0.03
H3f3cP02301 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H3f3cP02301 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H3f3cP02301 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
H3f3cP02301 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
H3f3cP02301 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H3f3cP02301 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H3f3cP02301 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H3f3cP02301 Tgds-204ENSMUST00000228543 1594 ntBASIC15.24■□□□□ 0.03
H3f3cP02301 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
H3f3cP02301 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H3f3cP02301 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.23■□□□□ 0.03
H3f3cP02301 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H3f3cP02301 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
H3f3cP02301 Gm44544-201ENSMUST00000207052 1844 ntBASIC15.23■□□□□ 0.03
H3f3cP02301 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
H3f3cP02301 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
H3f3cP02301 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H3f3cP02301 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC15.23■□□□□ 0.03
H3f3cP02301 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
H3f3cP02301 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC15.23■□□□□ 0.03
H3f3cP02301 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H3f3cP02301 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H3f3cP02301 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
H3f3cP02301 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
H3f3cP02301 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H3f3cP02301 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H3f3cP02301 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
H3f3cP02301 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
H3f3cP02301 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H3f3cP02301 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H3f3cP02301 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
H3f3cP02301 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
H3f3cP02301 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
H3f3cP02301 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
H3f3cP02301 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
H3f3cP02301 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC15.22■□□□□ 0.03
H3f3cP02301 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
H3f3cP02301 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
H3f3cP02301 Gm11927-201ENSMUST00000118472 759 ntBASIC15.22■□□□□ 0.03
H3f3cP02301 Gm12669-201ENSMUST00000122162 1009 ntBASIC15.22■□□□□ 0.03
H3f3cP02301 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
H3f3cP02301 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
H3f3cP02301 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.22■□□□□ 0.03
H3f3cP02301 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
H3f3cP02301 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
H3f3cP02301 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
H3f3cP02301 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
H3f3cP02301 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.22■□□□□ 0.03
H3f3cP02301 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
H3f3cP02301 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
H3f3cP02301 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
H3f3cP02301 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
H3f3cP02301 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
H3f3cP02301 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
H3f3cP02301 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC15.21■□□□□ 0.03
H3f3cP02301 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
H3f3cP02301 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC15.21■□□□□ 0.03
H3f3cP02301 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
H3f3cP02301 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
H3f3cP02301 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
H3f3cP02301 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
H3f3cP02301 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
H3f3cP02301 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
H3f3cP02301 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
H3f3cP02301 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
H3f3cP02301 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
H3f3cP02301 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.2■□□□□ 0.02
H3f3cP02301 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.2■□□□□ 0.02
H3f3cP02301 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
H3f3cP02301 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
H3f3cP02301 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
H3f3cP02301 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
H3f3cP02301 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
H3f3cP02301 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
H3f3cP02301 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.2■□□□□ 0.02
H3f3cP02301 Gm11249-201ENSMUST00000117071 859 ntBASIC15.2■□□□□ 0.02
H3f3cP02301 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
H3f3cP02301 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
H3f3cP02301 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
H3f3cP02301 Gm37856-201ENSMUST00000191634 999 ntBASIC15.2■□□□□ 0.02
H3f3cP02301 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
H3f3cP02301 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
H3f3cP02301 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
H3f3cP02301 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
H3f3cP02301 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 103.9 ms