Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Gm10493-201ENSMUST00000097270 612 ntBASIC16.79■□□□□ 0.28
Matn4O89029 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Matn4O89029 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Matn4O89029 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Matn4O89029 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Matn4O89029 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Matn4O89029 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.79■□□□□ 0.28
Matn4O89029 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Matn4O89029 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Matn4O89029 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Matn4O89029 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Matn4O89029 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Matn4O89029 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Matn4O89029 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Matn4O89029 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Matn4O89029 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Matn4O89029 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Matn4O89029 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.78■□□□□ 0.28
Matn4O89029 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.78■□□□□ 0.28
Matn4O89029 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Matn4O89029 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Matn4O89029 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Matn4O89029 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Matn4O89029 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Matn4O89029 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Matn4O89029 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Matn4O89029 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Matn4O89029 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.77■□□□□ 0.28
Matn4O89029 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.77■□□□□ 0.28
Matn4O89029 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.77■□□□□ 0.28
Matn4O89029 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.77■□□□□ 0.28
Matn4O89029 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Matn4O89029 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Matn4O89029 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Matn4O89029 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Matn4O89029 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Matn4O89029 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Matn4O89029 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Matn4O89029 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Matn4O89029 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.76■□□□□ 0.27
Matn4O89029 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
Matn4O89029 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Matn4O89029 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Matn4O89029 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Matn4O89029 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.76■□□□□ 0.27
Matn4O89029 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Matn4O89029 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Matn4O89029 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Matn4O89029 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Matn4O89029 Gm7514-201ENSMUST00000209475 934 ntBASIC16.76■□□□□ 0.27
Matn4O89029 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Matn4O89029 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.76■□□□□ 0.27
Matn4O89029 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Matn4O89029 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Matn4O89029 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Matn4O89029 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.76■□□□□ 0.27
Matn4O89029 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Matn4O89029 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Matn4O89029 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Matn4O89029 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Matn4O89029 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Matn4O89029 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Matn4O89029 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Matn4O89029 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Matn4O89029 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Matn4O89029 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Matn4O89029 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Matn4O89029 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.75■□□□□ 0.27
Matn4O89029 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Matn4O89029 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Matn4O89029 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Matn4O89029 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Matn4O89029 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Matn4O89029 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Matn4O89029 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Matn4O89029 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Matn4O89029 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Matn4O89029 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Matn4O89029 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Matn4O89029 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Matn4O89029 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Matn4O89029 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Matn4O89029 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Matn4O89029 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.74■□□□□ 0.27
Matn4O89029 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Matn4O89029 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Matn4O89029 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Matn4O89029 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Matn4O89029 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Matn4O89029 Mir8112-201ENSMUST00000184382 131 ntBASIC16.74■□□□□ 0.27
Matn4O89029 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.74■□□□□ 0.27
Matn4O89029 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Matn4O89029 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Matn4O89029 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Matn4O89029 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Matn4O89029 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Matn4O89029 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Matn4O89029 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Matn4O89029 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Matn4O89029 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms