Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC15.87■□□□□ 0.13
Hdac3O88895 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hdac3O88895 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Hdac3O88895 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hdac3O88895 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hdac3O88895 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hdac3O88895 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hdac3O88895 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hdac3O88895 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Hdac3O88895 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hdac3O88895 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hdac3O88895 Gm43672-201ENSMUST00000199072 1731 ntBASIC15.86■□□□□ 0.13
Hdac3O88895 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hdac3O88895 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hdac3O88895 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.86■□□□□ 0.13
Hdac3O88895 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Hdac3O88895 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Hdac3O88895 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Hdac3O88895 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Hdac3O88895 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC15.86■□□□□ 0.13
Hdac3O88895 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Hdac3O88895 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Hdac3O88895 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Hdac3O88895 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hdac3O88895 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hdac3O88895 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Hdac3O88895 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Hdac3O88895 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.86■□□□□ 0.13
Hdac3O88895 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hdac3O88895 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
Hdac3O88895 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hdac3O88895 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hdac3O88895 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Hdac3O88895 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hdac3O88895 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hdac3O88895 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.85■□□□□ 0.13
Hdac3O88895 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hdac3O88895 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hdac3O88895 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.85■□□□□ 0.13
Hdac3O88895 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC15.85■□□□□ 0.13
Hdac3O88895 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC15.85■□□□□ 0.13
Hdac3O88895 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Hdac3O88895 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC15.85■□□□□ 0.13
Hdac3O88895 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Hdac3O88895 AC107452.1-201ENSMUST00000227963 481 ntBASIC15.85■□□□□ 0.13
Hdac3O88895 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hdac3O88895 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hdac3O88895 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hdac3O88895 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC15.85■□□□□ 0.13
Hdac3O88895 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
Hdac3O88895 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hdac3O88895 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hdac3O88895 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
Hdac3O88895 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Hdac3O88895 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hdac3O88895 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hdac3O88895 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Hdac3O88895 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hdac3O88895 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hdac3O88895 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Hdac3O88895 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Hdac3O88895 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hdac3O88895 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hdac3O88895 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Hdac3O88895 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Hdac3O88895 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Hdac3O88895 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hdac3O88895 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hdac3O88895 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hdac3O88895 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hdac3O88895 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Hdac3O88895 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hdac3O88895 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hdac3O88895 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Hdac3O88895 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Hdac3O88895 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Hdac3O88895 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hdac3O88895 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hdac3O88895 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.83■□□□□ 0.12
Hdac3O88895 Gm37179-201ENSMUST00000194862 823 ntBASIC15.83■□□□□ 0.12
Hdac3O88895 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC15.83■□□□□ 0.12
Hdac3O88895 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
Hdac3O88895 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hdac3O88895 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hdac3O88895 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hdac3O88895 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Hdac3O88895 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Hdac3O88895 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hdac3O88895 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hdac3O88895 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hdac3O88895 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Hdac3O88895 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hdac3O88895 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Hdac3O88895 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hdac3O88895 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hdac3O88895 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
Hdac3O88895 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC15.82■□□□□ 0.12
Hdac3O88895 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hdac3O88895 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Hdac3O88895 Gm6211-202ENSMUST00000167849 925 ntBASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms