Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Best1O88870 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Best1O88870 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Best1O88870 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Best1O88870 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Best1O88870 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Best1O88870 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Best1O88870 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Best1O88870 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.09■□□□□ 0.33
Best1O88870 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Best1O88870 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Best1O88870 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Best1O88870 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Best1O88870 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Best1O88870 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Best1O88870 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Best1O88870 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Best1O88870 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Best1O88870 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Best1O88870 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Best1O88870 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Best1O88870 Gm27463-201ENSMUST00000183569 57 ntBASIC17.08■□□□□ 0.32
Best1O88870 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.08■□□□□ 0.32
Best1O88870 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Best1O88870 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Best1O88870 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Best1O88870 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Best1O88870 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Best1O88870 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Best1O88870 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Best1O88870 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Best1O88870 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Best1O88870 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Best1O88870 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Best1O88870 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Best1O88870 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Best1O88870 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Best1O88870 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Best1O88870 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Best1O88870 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Best1O88870 Gm13559-201ENSMUST00000120476 863 ntBASIC17.07■□□□□ 0.32
Best1O88870 Gm13836-201ENSMUST00000121159 501 ntBASIC17.07■□□□□ 0.32
Best1O88870 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.07■□□□□ 0.32
Best1O88870 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.07■□□□□ 0.32
Best1O88870 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Best1O88870 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.07■□□□□ 0.32
Best1O88870 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.07■□□□□ 0.32
Best1O88870 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Best1O88870 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Best1O88870 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Best1O88870 Idnk-204ENSMUST00000226010 1898 ntBASIC17.07■□□□□ 0.32
Best1O88870 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Best1O88870 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Best1O88870 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Best1O88870 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Best1O88870 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Best1O88870 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Best1O88870 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Best1O88870 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Best1O88870 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Best1O88870 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.06■□□□□ 0.32
Best1O88870 Gm11539-201ENSMUST00000119837 557 ntBASIC17.06■□□□□ 0.32
Best1O88870 Gm13436-201ENSMUST00000120418 567 ntBASIC17.06■□□□□ 0.32
Best1O88870 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Best1O88870 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Best1O88870 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.06■□□□□ 0.32
Best1O88870 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.06■□□□□ 0.32
Best1O88870 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Best1O88870 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.06■□□□□ 0.32
Best1O88870 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Best1O88870 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Best1O88870 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Best1O88870 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Best1O88870 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Best1O88870 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Best1O88870 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Best1O88870 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Best1O88870 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.05■□□□□ 0.32
Best1O88870 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Best1O88870 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Best1O88870 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Best1O88870 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.05■□□□□ 0.32
Best1O88870 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Best1O88870 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Best1O88870 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Best1O88870 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.05■□□□□ 0.32
Best1O88870 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Best1O88870 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Best1O88870 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Best1O88870 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Best1O88870 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Best1O88870 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Best1O88870 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Best1O88870 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Best1O88870 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Best1O88870 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Best1O88870 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Best1O88870 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Best1O88870 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Best1O88870 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms