Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Alx3O70137 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Alx3O70137 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Alx3O70137 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Alx3O70137 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Alx3O70137 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC16.12■□□□□ 0.17
Alx3O70137 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Alx3O70137 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Alx3O70137 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Alx3O70137 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Alx3O70137 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Alx3O70137 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Alx3O70137 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Alx3O70137 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Alx3O70137 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Alx3O70137 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Alx3O70137 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.12■□□□□ 0.17
Alx3O70137 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Alx3O70137 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Alx3O70137 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Alx3O70137 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Alx3O70137 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Alx3O70137 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Alx3O70137 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Alx3O70137 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Alx3O70137 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Alx3O70137 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Alx3O70137 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Alx3O70137 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Alx3O70137 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Alx3O70137 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Alx3O70137 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Alx3O70137 Gm8969-201ENSMUST00000199694 526 ntBASIC16.11■□□□□ 0.17
Alx3O70137 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.11■□□□□ 0.17
Alx3O70137 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.11■□□□□ 0.17
Alx3O70137 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.11■□□□□ 0.17
Alx3O70137 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Alx3O70137 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Alx3O70137 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Alx3O70137 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Alx3O70137 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Alx3O70137 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Alx3O70137 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Alx3O70137 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Alx3O70137 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Alx3O70137 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Alx3O70137 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Alx3O70137 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Alx3O70137 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.1■□□□□ 0.17
Alx3O70137 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Alx3O70137 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.1■□□□□ 0.17
Alx3O70137 Gm10849-201ENSMUST00000100397 618 ntBASIC16.1■□□□□ 0.17
Alx3O70137 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Alx3O70137 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Alx3O70137 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.1■□□□□ 0.17
Alx3O70137 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.1■□□□□ 0.17
Alx3O70137 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Alx3O70137 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Alx3O70137 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Alx3O70137 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Alx3O70137 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.1■□□□□ 0.17
Alx3O70137 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Alx3O70137 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Alx3O70137 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Alx3O70137 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Alx3O70137 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.1■□□□□ 0.17
Alx3O70137 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Alx3O70137 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Alx3O70137 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Alx3O70137 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Alx3O70137 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Alx3O70137 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Alx3O70137 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Alx3O70137 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Alx3O70137 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.09■□□□□ 0.17
Alx3O70137 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.09■□□□□ 0.17
Alx3O70137 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Alx3O70137 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Alx3O70137 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Alx3O70137 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Alx3O70137 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Alx3O70137 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Alx3O70137 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Alx3O70137 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.08■□□□□ 0.17
Alx3O70137 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Alx3O70137 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Alx3O70137 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Alx3O70137 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.08■□□□□ 0.17
Alx3O70137 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Alx3O70137 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Alx3O70137 Gm7290-201ENSMUST00000104990 617 ntBASIC16.08■□□□□ 0.16
Alx3O70137 Gm12918-201ENSMUST00000120234 636 ntBASIC16.08■□□□□ 0.16
Alx3O70137 Gm15710-201ENSMUST00000121821 636 ntBASIC16.08■□□□□ 0.16
Alx3O70137 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.16
Alx3O70137 Gm18284-201ENSMUST00000172604 624 ntBASIC16.08■□□□□ 0.16
Alx3O70137 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.08■□□□□ 0.16
Alx3O70137 Gm5075-201ENSMUST00000196916 622 ntBASIC16.08■□□□□ 0.16
Alx3O70137 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.08■□□□□ 0.16
Alx3O70137 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.08■□□□□ 0.16
Alx3O70137 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms