Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rdh5O55240 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rdh5O55240 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rdh5O55240 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rdh5O55240 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rdh5O55240 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.84■□□□□ 0.29
Rdh5O55240 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.84■□□□□ 0.29
Rdh5O55240 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rdh5O55240 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Rdh5O55240 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Rdh5O55240 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rdh5O55240 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.83■□□□□ 0.28
Rdh5O55240 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rdh5O55240 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.83■□□□□ 0.28
Rdh5O55240 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rdh5O55240 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rdh5O55240 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rdh5O55240 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rdh5O55240 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rdh5O55240 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.82■□□□□ 0.28
Rdh5O55240 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.82■□□□□ 0.28
Rdh5O55240 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rdh5O55240 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rdh5O55240 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rdh5O55240 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.82■□□□□ 0.28
Rdh5O55240 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rdh5O55240 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.82■□□□□ 0.28
Rdh5O55240 Gm2559-201ENSMUST00000201323 363 ntBASIC16.82■□□□□ 0.28
Rdh5O55240 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rdh5O55240 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rdh5O55240 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.82■□□□□ 0.28
Rdh5O55240 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Rdh5O55240 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rdh5O55240 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rdh5O55240 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rdh5O55240 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rdh5O55240 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rdh5O55240 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rdh5O55240 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rdh5O55240 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Rdh5O55240 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Rdh5O55240 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rdh5O55240 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rdh5O55240 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rdh5O55240 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rdh5O55240 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.81■□□□□ 0.28
Rdh5O55240 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Rdh5O55240 Gm8520-201ENSMUST00000186517 868 ntBASIC16.81■□□□□ 0.28
Rdh5O55240 Gm20049-201ENSMUST00000219950 730 ntBASIC16.81■□□□□ 0.28
Rdh5O55240 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rdh5O55240 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rdh5O55240 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rdh5O55240 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Rdh5O55240 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rdh5O55240 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rdh5O55240 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rdh5O55240 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rdh5O55240 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rdh5O55240 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rdh5O55240 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rdh5O55240 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Rdh5O55240 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rdh5O55240 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rdh5O55240 Gm11927-201ENSMUST00000118472 759 ntBASIC16.8■□□□□ 0.28
Rdh5O55240 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.8■□□□□ 0.28
Rdh5O55240 Gm22240-201ENSMUST00000175225 82 ntBASIC16.8■□□□□ 0.28
Rdh5O55240 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rdh5O55240 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.8■□□□□ 0.28
Rdh5O55240 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rdh5O55240 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Rdh5O55240 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rdh5O55240 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.8■□□□□ 0.28
Rdh5O55240 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rdh5O55240 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rdh5O55240 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rdh5O55240 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rdh5O55240 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rdh5O55240 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Rdh5O55240 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rdh5O55240 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rdh5O55240 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rdh5O55240 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rdh5O55240 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rdh5O55240 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rdh5O55240 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rdh5O55240 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.79■□□□□ 0.28
Rdh5O55240 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rdh5O55240 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Rdh5O55240 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rdh5O55240 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Rdh5O55240 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rdh5O55240 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rdh5O55240 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rdh5O55240 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rdh5O55240 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rdh5O55240 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rdh5O55240 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rdh5O55240 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.78■□□□□ 0.28
Rdh5O55240 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rdh5O55240 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms