Protein–RNA interactions for Protein: O35493

Clk4, Dual specificity protein kinase CLK4, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4O35493 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clk4O35493 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clk4O35493 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.03■□□□□ 0.32
Clk4O35493 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clk4O35493 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.03■□□□□ 0.32
Clk4O35493 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clk4O35493 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Clk4O35493 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clk4O35493 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clk4O35493 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Clk4O35493 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clk4O35493 Gm12896-201ENSMUST00000118430 226 ntBASIC17.03■□□□□ 0.32
Clk4O35493 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.03■□□□□ 0.32
Clk4O35493 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Clk4O35493 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clk4O35493 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clk4O35493 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.03■□□□□ 0.32
Clk4O35493 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Clk4O35493 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Clk4O35493 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clk4O35493 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clk4O35493 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clk4O35493 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Clk4O35493 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clk4O35493 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Clk4O35493 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clk4O35493 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.02■□□□□ 0.32
Clk4O35493 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Clk4O35493 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Clk4O35493 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.02■□□□□ 0.32
Clk4O35493 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clk4O35493 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clk4O35493 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Clk4O35493 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clk4O35493 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clk4O35493 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clk4O35493 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clk4O35493 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Clk4O35493 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Clk4O35493 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.01■□□□□ 0.31
Clk4O35493 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.01■□□□□ 0.31
Clk4O35493 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clk4O35493 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Clk4O35493 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clk4O35493 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.01■□□□□ 0.31
Clk4O35493 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.01■□□□□ 0.31
Clk4O35493 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Clk4O35493 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clk4O35493 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clk4O35493 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clk4O35493 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Clk4O35493 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clk4O35493 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Clk4O35493 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Clk4O35493 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clk4O35493 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clk4O35493 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.01■□□□□ 0.31
Clk4O35493 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clk4O35493 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clk4O35493 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Clk4O35493 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clk4O35493 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
Clk4O35493 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17■□□□□ 0.31
Clk4O35493 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17■□□□□ 0.31
Clk4O35493 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clk4O35493 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Clk4O35493 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17■□□□□ 0.31
Clk4O35493 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17■□□□□ 0.31
Clk4O35493 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17■□□□□ 0.31
Clk4O35493 Gm5297-201ENSMUST00000198555 1171 ntBASIC17■□□□□ 0.31
Clk4O35493 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clk4O35493 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Clk4O35493 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clk4O35493 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Clk4O35493 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Clk4O35493 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clk4O35493 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Clk4O35493 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.99■□□□□ 0.31
Clk4O35493 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clk4O35493 Gm11927-201ENSMUST00000118472 759 ntBASIC16.99■□□□□ 0.31
Clk4O35493 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Clk4O35493 Gm37856-201ENSMUST00000191634 999 ntBASIC16.99■□□□□ 0.31
Clk4O35493 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Clk4O35493 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clk4O35493 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.99■□□□□ 0.31
Clk4O35493 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clk4O35493 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clk4O35493 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Clk4O35493 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clk4O35493 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clk4O35493 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clk4O35493 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clk4O35493 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clk4O35493 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clk4O35493 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clk4O35493 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clk4O35493 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clk4O35493 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clk4O35493 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clk4O35493 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms