Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Alx4O35137 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.86■□□□□ 0.13
Alx4O35137 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC15.86■□□□□ 0.13
Alx4O35137 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Alx4O35137 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Alx4O35137 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Alx4O35137 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Alx4O35137 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.85■□□□□ 0.13
Alx4O35137 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Alx4O35137 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Alx4O35137 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Alx4O35137 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Alx4O35137 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC15.85■□□□□ 0.13
Alx4O35137 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Alx4O35137 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Alx4O35137 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Alx4O35137 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.85■□□□□ 0.13
Alx4O35137 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Alx4O35137 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Alx4O35137 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Alx4O35137 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Alx4O35137 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.84■□□□□ 0.13
Alx4O35137 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Alx4O35137 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Alx4O35137 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.84■□□□□ 0.13
Alx4O35137 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Alx4O35137 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Alx4O35137 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Alx4O35137 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Alx4O35137 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Alx4O35137 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC15.84■□□□□ 0.13
Alx4O35137 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
Alx4O35137 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
Alx4O35137 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Alx4O35137 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.84■□□□□ 0.13
Alx4O35137 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Alx4O35137 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.84■□□□□ 0.13
Alx4O35137 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Alx4O35137 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Alx4O35137 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Alx4O35137 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Alx4O35137 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Alx4O35137 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Alx4O35137 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.83■□□□□ 0.13
Alx4O35137 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Alx4O35137 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Alx4O35137 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Alx4O35137 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Alx4O35137 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.83■□□□□ 0.12
Alx4O35137 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC15.83■□□□□ 0.12
Alx4O35137 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC15.83■□□□□ 0.12
Alx4O35137 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Alx4O35137 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Alx4O35137 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Alx4O35137 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Alx4O35137 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Alx4O35137 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Alx4O35137 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
Alx4O35137 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Alx4O35137 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Alx4O35137 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.82■□□□□ 0.12
Alx4O35137 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Alx4O35137 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Alx4O35137 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Alx4O35137 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Alx4O35137 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Alx4O35137 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Alx4O35137 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Alx4O35137 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Alx4O35137 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.82■□□□□ 0.12
Alx4O35137 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Alx4O35137 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
Alx4O35137 Gm10129-202ENSMUST00000193100 1316 ntBASIC15.82■□□□□ 0.12
Alx4O35137 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Alx4O35137 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Alx4O35137 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Alx4O35137 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Alx4O35137 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Alx4O35137 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Alx4O35137 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Alx4O35137 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Alx4O35137 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Alx4O35137 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Alx4O35137 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Alx4O35137 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Alx4O35137 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Alx4O35137 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Alx4O35137 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Alx4O35137 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Alx4O35137 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Alx4O35137 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.81■□□□□ 0.12
Alx4O35137 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Alx4O35137 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Alx4O35137 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Alx4O35137 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Alx4O35137 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Alx4O35137 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Alx4O35137 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Alx4O35137 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Alx4O35137 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms