Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hdac1O09106 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Hdac1O09106 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Hdac1O09106 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hdac1O09106 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC21.17■□□□□ 0.98
Hdac1O09106 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hdac1O09106 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hdac1O09106 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hdac1O09106 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hdac1O09106 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hdac1O09106 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Hdac1O09106 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hdac1O09106 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Hdac1O09106 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hdac1O09106 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hdac1O09106 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Hdac1O09106 AC140264.2-202ENSMUST00000218746 817 ntBASIC21.16■□□□□ 0.98
Hdac1O09106 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hdac1O09106 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hdac1O09106 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hdac1O09106 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hdac1O09106 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hdac1O09106 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Hdac1O09106 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Hdac1O09106 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Hdac1O09106 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC21.15■□□□□ 0.98
Hdac1O09106 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hdac1O09106 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Hdac1O09106 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC21.15■□□□□ 0.98
Hdac1O09106 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hdac1O09106 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hdac1O09106 Gm38285-201ENSMUST00000192928 922 ntBASIC21.15■□□□□ 0.98
Hdac1O09106 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC21.15■□□□□ 0.98
Hdac1O09106 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC21.15■□□□□ 0.98
Hdac1O09106 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hdac1O09106 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Hdac1O09106 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hdac1O09106 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hdac1O09106 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Hdac1O09106 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
Hdac1O09106 Gm13509-201ENSMUST00000119733 1308 ntBASIC21.14■□□□□ 0.97
Hdac1O09106 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Hdac1O09106 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Hdac1O09106 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hdac1O09106 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hdac1O09106 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
Hdac1O09106 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hdac1O09106 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hdac1O09106 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hdac1O09106 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC21.14■□□□□ 0.97
Hdac1O09106 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Hdac1O09106 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hdac1O09106 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Hdac1O09106 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Hdac1O09106 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Hdac1O09106 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Hdac1O09106 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hdac1O09106 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hdac1O09106 AC125311.2-201ENSMUST00000227477 1940 ntBASIC21.13■□□□□ 0.97
Hdac1O09106 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Hdac1O09106 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hdac1O09106 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Hdac1O09106 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Hdac1O09106 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hdac1O09106 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hdac1O09106 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Hdac1O09106 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Hdac1O09106 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hdac1O09106 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC21.12■□□□□ 0.97
Hdac1O09106 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hdac1O09106 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Hdac1O09106 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Hdac1O09106 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hdac1O09106 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hdac1O09106 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Hdac1O09106 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC21.12■□□□□ 0.97
Hdac1O09106 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hdac1O09106 Gm15743-202ENSMUST00000182690 1901 ntBASIC21.12■□□□□ 0.97
Hdac1O09106 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hdac1O09106 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hdac1O09106 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hdac1O09106 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Hdac1O09106 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hdac1O09106 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Hdac1O09106 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Hdac1O09106 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Hdac1O09106 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Hdac1O09106 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC21.11■□□□□ 0.97
Hdac1O09106 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hdac1O09106 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hdac1O09106 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hdac1O09106 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hdac1O09106 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC21.1■□□□□ 0.97
Hdac1O09106 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC21.1■□□□□ 0.97
Hdac1O09106 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hdac1O09106 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hdac1O09106 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC21.1■□□□□ 0.97
Hdac1O09106 Gm29791-202ENSMUST00000207888 369 ntBASIC21.1■□□□□ 0.97
Hdac1O09106 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
Hdac1O09106 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms