Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ebf3O08791 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ebf3O08791 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.42■□□□□ 0.54
Ebf3O08791 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ebf3O08791 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.42■□□□□ 0.54
Ebf3O08791 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ebf3O08791 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Ebf3O08791 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ebf3O08791 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ebf3O08791 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ebf3O08791 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ebf3O08791 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ebf3O08791 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ebf3O08791 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ebf3O08791 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.42■□□□□ 0.54
Ebf3O08791 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.42■□□□□ 0.54
Ebf3O08791 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ebf3O08791 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
Ebf3O08791 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ebf3O08791 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.41■□□□□ 0.54
Ebf3O08791 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ebf3O08791 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.41■□□□□ 0.54
Ebf3O08791 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ebf3O08791 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ebf3O08791 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ebf3O08791 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ebf3O08791 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ebf3O08791 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ebf3O08791 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.41■□□□□ 0.54
Ebf3O08791 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ebf3O08791 Gm12382-201ENSMUST00000122005 922 ntBASIC18.41■□□□□ 0.54
Ebf3O08791 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.41■□□□□ 0.54
Ebf3O08791 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.41■□□□□ 0.54
Ebf3O08791 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.41■□□□□ 0.54
Ebf3O08791 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ebf3O08791 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ebf3O08791 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ebf3O08791 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ebf3O08791 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ebf3O08791 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ebf3O08791 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.41■□□□□ 0.54
Ebf3O08791 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ebf3O08791 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ebf3O08791 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.4■□□□□ 0.54
Ebf3O08791 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.4■□□□□ 0.54
Ebf3O08791 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Ebf3O08791 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Ebf3O08791 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ebf3O08791 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.4■□□□□ 0.54
Ebf3O08791 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.4■□□□□ 0.54
Ebf3O08791 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ebf3O08791 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.4■□□□□ 0.54
Ebf3O08791 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ebf3O08791 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ebf3O08791 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ebf3O08791 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ebf3O08791 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Ebf3O08791 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ebf3O08791 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ebf3O08791 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ebf3O08791 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ebf3O08791 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.39■□□□□ 0.53
Ebf3O08791 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ebf3O08791 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ebf3O08791 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ebf3O08791 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.39■□□□□ 0.53
Ebf3O08791 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.39■□□□□ 0.53
Ebf3O08791 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ebf3O08791 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ebf3O08791 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ebf3O08791 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ebf3O08791 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Ebf3O08791 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ebf3O08791 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ebf3O08791 Timm23-208ENSMUST00000226683 750 ntBASIC18.38■□□□□ 0.53
Ebf3O08791 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ebf3O08791 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ebf3O08791 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Ebf3O08791 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ebf3O08791 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
Ebf3O08791 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ebf3O08791 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ebf3O08791 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ebf3O08791 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ebf3O08791 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.38■□□□□ 0.53
Ebf3O08791 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ebf3O08791 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ebf3O08791 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ebf3O08791 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Ebf3O08791 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.37■□□□□ 0.53
Ebf3O08791 Gm11539-201ENSMUST00000119837 557 ntBASIC18.37■□□□□ 0.53
Ebf3O08791 Gm13436-201ENSMUST00000120418 567 ntBASIC18.37■□□□□ 0.53
Ebf3O08791 Gm13559-201ENSMUST00000120476 863 ntBASIC18.37■□□□□ 0.53
Ebf3O08791 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ebf3O08791 Mir6349-201ENSMUST00000184059 97 ntBASIC18.37■□□□□ 0.53
Ebf3O08791 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.37■□□□□ 0.53
Ebf3O08791 Odf3b-204ENSMUST00000227834 930 ntBASIC18.37■□□□□ 0.53
Ebf3O08791 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ebf3O08791 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Ebf3O08791 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms